Protein–RNA interactions for Protein: P03953

Cfd, Complement factor D, mousemouse

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CfdP03953 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC10.89□□□□□ -0.67
CfdP03953 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
CfdP03953 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
CfdP03953 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
CfdP03953 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
CfdP03953 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
CfdP03953 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
CfdP03953 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
CfdP03953 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
CfdP03953 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
CfdP03953 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC10.89□□□□□ -0.67
CfdP03953 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
CfdP03953 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
CfdP03953 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
CfdP03953 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
CfdP03953 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
CfdP03953 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
CfdP03953 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
CfdP03953 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
CfdP03953 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
CfdP03953 Gm12585-201ENSMUST00000117307 290 ntBASIC10.89□□□□□ -0.67
CfdP03953 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
CfdP03953 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC10.89□□□□□ -0.67
CfdP03953 Gm27494-201ENSMUST00000184735 189 ntBASIC10.89□□□□□ -0.67
CfdP03953 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
CfdP03953 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC10.89□□□□□ -0.67
CfdP03953 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC10.89□□□□□ -0.67
CfdP03953 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC10.89□□□□□ -0.67
CfdP03953 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
CfdP03953 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
CfdP03953 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC10.89□□□□□ -0.67
CfdP03953 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
CfdP03953 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
CfdP03953 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
CfdP03953 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
CfdP03953 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
CfdP03953 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
CfdP03953 Gm37437-201ENSMUST00000194451 1937 ntBASIC10.89□□□□□ -0.67
CfdP03953 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
CfdP03953 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
CfdP03953 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC10.89□□□□□ -0.67
CfdP03953 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
CfdP03953 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
CfdP03953 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
CfdP03953 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
CfdP03953 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
CfdP03953 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
CfdP03953 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
CfdP03953 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
CfdP03953 AC122860.2-201ENSMUST00000217967 2671 ntBASIC10.89□□□□□ -0.67
CfdP03953 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
CfdP03953 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
CfdP03953 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
CfdP03953 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
CfdP03953 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
CfdP03953 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
CfdP03953 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
CfdP03953 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
CfdP03953 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
CfdP03953 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC10.88□□□□□ -0.67
CfdP03953 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
CfdP03953 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
CfdP03953 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
CfdP03953 Gm7224-201ENSMUST00000121359 2066 ntBASIC10.88□□□□□ -0.67
CfdP03953 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
CfdP03953 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
CfdP03953 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
CfdP03953 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC10.88□□□□□ -0.67
CfdP03953 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
CfdP03953 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC10.88□□□□□ -0.67
CfdP03953 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
CfdP03953 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
CfdP03953 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC10.88□□□□□ -0.67
CfdP03953 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC10.88□□□□□ -0.67
CfdP03953 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
CfdP03953 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
CfdP03953 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
CfdP03953 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC10.88□□□□□ -0.67
CfdP03953 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
CfdP03953 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
CfdP03953 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC10.88□□□□□ -0.67
CfdP03953 Mir6990-201ENSMUST00000183724 91 ntBASIC10.88□□□□□ -0.67
CfdP03953 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC10.88□□□□□ -0.67
CfdP03953 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
CfdP03953 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
CfdP03953 Gm17870-201ENSMUST00000219489 1174 ntBASIC10.88□□□□□ -0.67
CfdP03953 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
CfdP03953 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
CfdP03953 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
CfdP03953 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
CfdP03953 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
CfdP03953 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
CfdP03953 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
CfdP03953 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
CfdP03953 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
CfdP03953 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
CfdP03953 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
CfdP03953 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
CfdP03953 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
CfdP03953 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms