Protein–RNA interactions for Protein: O88696

Clpp, ATP-dependent Clp protease proteolytic subunit, mitochondrial, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClppO88696 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
ClppO88696 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
ClppO88696 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
ClppO88696 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
ClppO88696 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
ClppO88696 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
ClppO88696 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
ClppO88696 Gm9755-201ENSMUST00000032981 1356 ntBASIC12.81□□□□□ -0.36
ClppO88696 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
ClppO88696 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
ClppO88696 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
ClppO88696 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
ClppO88696 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
ClppO88696 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
ClppO88696 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
ClppO88696 Aldh3a1-202ENSMUST00000108716 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
ClppO88696 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
ClppO88696 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
ClppO88696 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
ClppO88696 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
ClppO88696 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
ClppO88696 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
ClppO88696 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC12.8□□□□□ -0.36
ClppO88696 Gm17420-201ENSMUST00000164753 153 ntBASIC12.8□□□□□ -0.36
ClppO88696 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
ClppO88696 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
ClppO88696 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC12.8□□□□□ -0.36
ClppO88696 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
ClppO88696 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC12.8□□□□□ -0.36
ClppO88696 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC12.8□□□□□ -0.36
ClppO88696 AC073947.2-201ENSMUST00000215888 1130 ntBASIC12.8□□□□□ -0.36
ClppO88696 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
ClppO88696 Gm10478-201ENSMUST00000084451 396 ntBASIC12.8□□□□□ -0.36
ClppO88696 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
ClppO88696 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
ClppO88696 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
ClppO88696 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
ClppO88696 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
ClppO88696 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
ClppO88696 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
ClppO88696 AC154747.3-201ENSMUST00000224471 3470 ntBASIC12.8□□□□□ -0.36
ClppO88696 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
ClppO88696 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
ClppO88696 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC12.8□□□□□ -0.36
ClppO88696 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC12.8□□□□□ -0.36
ClppO88696 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
ClppO88696 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
ClppO88696 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
ClppO88696 Mfsd7a-201ENSMUST00000031455 2508 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
ClppO88696 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC12.8□□□□□ -0.36
ClppO88696 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
ClppO88696 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ClppO88696 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
ClppO88696 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ClppO88696 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ClppO88696 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ClppO88696 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC12.79□□□□□ -0.36
ClppO88696 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
ClppO88696 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
ClppO88696 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ClppO88696 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ClppO88696 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
ClppO88696 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
ClppO88696 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
ClppO88696 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
ClppO88696 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC12.79□□□□□ -0.36
ClppO88696 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC12.79□□□□□ -0.36
ClppO88696 Gm22331-201ENSMUST00000158066 136 ntBASIC12.79□□□□□ -0.36
ClppO88696 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC12.79□□□□□ -0.36
ClppO88696 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC12.79□□□□□ -0.36
ClppO88696 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC12.79□□□□□ -0.36
ClppO88696 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
ClppO88696 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ClppO88696 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
ClppO88696 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
ClppO88696 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
ClppO88696 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
ClppO88696 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
ClppO88696 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ClppO88696 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC12.79□□□□□ -0.36
ClppO88696 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
ClppO88696 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ClppO88696 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
ClppO88696 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
ClppO88696 Gm43860-201ENSMUST00000201742 2705 ntBASIC12.79□□□□□ -0.36
ClppO88696 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
ClppO88696 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC12.79□□□□□ -0.36
ClppO88696 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ClppO88696 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
ClppO88696 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ClppO88696 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC12.79□□□□□ -0.36
ClppO88696 AC116503.1-201ENSMUST00000215445 2192 ntBASIC12.79□□□□□ -0.36
ClppO88696 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
ClppO88696 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
ClppO88696 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC12.78□□□□□ -0.36
ClppO88696 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
ClppO88696 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
ClppO88696 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
ClppO88696 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
ClppO88696 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 52.7 ms