Protein–RNA interactions for Protein: O70481

Ubr1, E3 ubiquitin-protein ligase UBR1, mousemouse

Predictions only

Length 1,757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1O70481 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Ubr1O70481 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ubr1O70481 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC16.6■□□□□ 0.25
Ubr1O70481 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ubr1O70481 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Ubr1O70481 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC16.6■□□□□ 0.25
Ubr1O70481 AC159308.2-201ENSMUST00000213592 2325 ntBASIC16.6■□□□□ 0.25
Ubr1O70481 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Ubr1O70481 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ubr1O70481 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ubr1O70481 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ubr1O70481 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ubr1O70481 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC16.59■□□□□ 0.25
Ubr1O70481 Gm23949-201ENSMUST00000104027 127 ntBASIC16.59■□□□□ 0.25
Ubr1O70481 Gm14644-201ENSMUST00000116671 647 ntBASIC16.59■□□□□ 0.25
Ubr1O70481 Dusp13-204ENSMUST00000120984 976 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ubr1O70481 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC16.59■□□□□ 0.25
Ubr1O70481 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC16.59■□□□□ 0.25
Ubr1O70481 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC16.59■□□□□ 0.25
Ubr1O70481 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Ubr1O70481 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC16.59■□□□□ 0.25
Ubr1O70481 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ubr1O70481 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ubr1O70481 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ubr1O70481 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ubr1O70481 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ubr1O70481 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ubr1O70481 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Ubr1O70481 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Ubr1O70481 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ubr1O70481 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ubr1O70481 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ubr1O70481 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC16.59■□□□□ 0.25
Ubr1O70481 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ubr1O70481 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Ubr1O70481 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ubr1O70481 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ubr1O70481 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Ubr1O70481 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Ubr1O70481 Gm24231-201ENSMUST00000104315 133 ntBASIC16.59■□□□□ 0.25
Ubr1O70481 Gm5638-201ENSMUST00000118618 1258 ntBASIC16.59■□□□□ 0.25
Ubr1O70481 Gm12266-201ENSMUST00000120311 962 ntBASIC16.59■□□□□ 0.25
Ubr1O70481 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC16.59■□□□□ 0.25
Ubr1O70481 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Ubr1O70481 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC16.59■□□□□ 0.25
Ubr1O70481 Rpl24-201ENSMUST00000023269 677 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ubr1O70481 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ubr1O70481 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Ubr1O70481 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Ubr1O70481 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC16.58■□□□□ 0.25
Ubr1O70481 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Ubr1O70481 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.25
Ubr1O70481 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC16.58■□□□□ 0.25
Ubr1O70481 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Ubr1O70481 Gm30238-201ENSMUST00000195528 2603 ntBASIC16.58■□□□□ 0.25
Ubr1O70481 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
Ubr1O70481 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Ubr1O70481 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Ubr1O70481 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC16.58■□□□□ 0.25
Ubr1O70481 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Ubr1O70481 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Ubr1O70481 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ubr1O70481 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ubr1O70481 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC16.58■□□□□ 0.24
Ubr1O70481 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC16.58■□□□□ 0.24
Ubr1O70481 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC16.58■□□□□ 0.24
Ubr1O70481 Gm44126-201ENSMUST00000204831 514 ntBASIC16.58■□□□□ 0.24
Ubr1O70481 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Ubr1O70481 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ubr1O70481 Mir219a-1-201ENSMUST00000083621 110 ntBASIC16.58■□□□□ 0.24
Ubr1O70481 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ubr1O70481 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ubr1O70481 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC16.58■□□□□ 0.24
Ubr1O70481 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ubr1O70481 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Ubr1O70481 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ubr1O70481 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Ubr1O70481 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Ubr1O70481 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ubr1O70481 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ubr1O70481 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Ubr1O70481 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ubr1O70481 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Ubr1O70481 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Ubr1O70481 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ubr1O70481 Gm11989-201ENSMUST00000117240 672 ntBASIC16.57■□□□□ 0.24
Ubr1O70481 Gm6335-201ENSMUST00000118081 1194 ntBASIC16.57■□□□□ 0.24
Ubr1O70481 Gm11362-201ENSMUST00000118838 850 ntBASIC16.57■□□□□ 0.24
Ubr1O70481 Gm7816-201ENSMUST00000119884 1194 ntBASIC16.57■□□□□ 0.24
Ubr1O70481 Gm15542-201ENSMUST00000121585 1194 ntBASIC16.57■□□□□ 0.24
Ubr1O70481 Gm6039-201ENSMUST00000121667 1250 ntBASIC16.57■□□□□ 0.24
Ubr1O70481 Gm19353-201ENSMUST00000184561 445 ntBASIC16.57■□□□□ 0.24
Ubr1O70481 Gm17827-201ENSMUST00000211825 742 ntBASIC16.57■□□□□ 0.24
Ubr1O70481 Gm21027-201ENSMUST00000219300 1236 ntBASIC16.57■□□□□ 0.24
Ubr1O70481 AC154276.3-201ENSMUST00000227643 998 ntBASIC16.57■□□□□ 0.24
Ubr1O70481 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ubr1O70481 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ubr1O70481 Gm6210-201ENSMUST00000204734 1942 ntBASIC16.57■□□□□ 0.24
Ubr1O70481 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Ubr1O70481 Retreg1-206ENSMUST00000228306 1430 ntBASIC16.57■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 69 ms