Protein–RNA interactions for Protein: O35134

Polr1a, DNA-directed RNA polymerase I subunit RPA1, mousemouse

Known RBP Predictions only

Length 1,717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr1aO35134 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Polr1aO35134 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Polr1aO35134 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Polr1aO35134 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Polr1aO35134 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Polr1aO35134 Gm9062-201ENSMUST00000117712 727 ntBASIC19.68■□□□□ 0.74
Polr1aO35134 Gm12208-201ENSMUST00000122004 163 ntBASIC19.68■□□□□ 0.74
Polr1aO35134 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Polr1aO35134 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Polr1aO35134 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC19.68■□□□□ 0.74
Polr1aO35134 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Polr1aO35134 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Polr1aO35134 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Polr1aO35134 Gm9924-202ENSMUST00000192760 2311 ntBASIC19.68■□□□□ 0.74
Polr1aO35134 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Polr1aO35134 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC19.68■□□□□ 0.74
Polr1aO35134 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Polr1aO35134 Retreg1-206ENSMUST00000228306 1430 ntBASIC19.68■□□□□ 0.74
Polr1aO35134 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Polr1aO35134 Gm5525-201ENSMUST00000190438 1312 ntBASIC19.68■□□□□ 0.74
Polr1aO35134 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Polr1aO35134 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Polr1aO35134 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
Polr1aO35134 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC19.68■□□□□ 0.74
Polr1aO35134 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Polr1aO35134 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Polr1aO35134 Gm14058-201ENSMUST00000116082 735 ntBASIC19.68■□□□□ 0.74
Polr1aO35134 Ccser2-208ENSMUST00000183007 1293 ntTSL 5 BASIC19.68■□□□□ 0.74
Polr1aO35134 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Polr1aO35134 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Polr1aO35134 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Polr1aO35134 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Polr1aO35134 AC122314.1-201ENSMUST00000223056 2239 ntBASIC19.67■□□□□ 0.74
Polr1aO35134 Gm13142-201ENSMUST00000117213 1453 ntBASIC19.67■□□□□ 0.74
Polr1aO35134 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Polr1aO35134 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Polr1aO35134 Ptprs-211ENSMUST00000223859 5588 ntBASIC19.67■□□□□ 0.74
Polr1aO35134 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Polr1aO35134 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Polr1aO35134 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Polr1aO35134 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Polr1aO35134 Gm826-202ENSMUST00000109475 803 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
Polr1aO35134 Snx29-202ENSMUST00000115814 1125 ntTSL 5 BASIC19.67■□□□□ 0.74
Polr1aO35134 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC19.67■□□□□ 0.74
Polr1aO35134 Gm16308-201ENSMUST00000162171 940 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Polr1aO35134 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Polr1aO35134 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Polr1aO35134 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Polr1aO35134 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Polr1aO35134 Olfr1250-201ENSMUST00000099768 1139 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Polr1aO35134 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC19.67■□□□□ 0.74
Polr1aO35134 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Polr1aO35134 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Polr1aO35134 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Polr1aO35134 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC19.67■□□□□ 0.74
Polr1aO35134 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Polr1aO35134 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Polr1aO35134 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Polr1aO35134 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Polr1aO35134 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Polr1aO35134 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC19.66■□□□□ 0.74
Polr1aO35134 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Polr1aO35134 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Polr1aO35134 AC123619.2-202ENSMUST00000225097 1568 ntBASIC19.66■□□□□ 0.74
Polr1aO35134 Ighv1-52-201ENSMUST00000103522 348 ntAPPRIS ALT2 BASIC19.66■□□□□ 0.74
Polr1aO35134 CT009713.8-201ENSMUST00000225448 560 ntBASIC19.66■□□□□ 0.74
Polr1aO35134 Gm43858-201ENSMUST00000199418 1778 ntBASIC19.66■□□□□ 0.74
Polr1aO35134 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Polr1aO35134 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Polr1aO35134 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Polr1aO35134 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Polr1aO35134 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Polr1aO35134 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Polr1aO35134 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Polr1aO35134 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Polr1aO35134 Gm5638-201ENSMUST00000118618 1258 ntBASIC19.65■□□□□ 0.74
Polr1aO35134 Gm12501-201ENSMUST00000119163 529 ntBASIC19.65■□□□□ 0.74
Polr1aO35134 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Polr1aO35134 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC19.65■□□□□ 0.74
Polr1aO35134 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Polr1aO35134 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC19.65■□□□□ 0.74
Polr1aO35134 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC19.65■□□□□ 0.74
Polr1aO35134 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC19.65■□□□□ 0.74
Polr1aO35134 Gm10179-201ENSMUST00000086233 688 ntBASIC19.65■□□□□ 0.74
Polr1aO35134 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Polr1aO35134 Gm21811-201ENSMUST00000096485 930 ntBASIC19.65■□□□□ 0.74
Polr1aO35134 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Polr1aO35134 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Polr1aO35134 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Polr1aO35134 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Polr1aO35134 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Polr1aO35134 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Polr1aO35134 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Polr1aO35134 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Polr1aO35134 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Polr1aO35134 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Polr1aO35134 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Polr1aO35134 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Polr1aO35134 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Polr1aO35134 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC19.65■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms