Protein–RNA interactions for Protein: O08848

Trove2, 60 kDa SS-A/Ro ribonucleoprotein, mousemouse

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trove2O08848 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trove2O08848 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trove2O08848 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trove2O08848 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC13.42□□□□□ -0.26
Trove2O08848 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trove2O08848 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trove2O08848 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trove2O08848 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Trove2O08848 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trove2O08848 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trove2O08848 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trove2O08848 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trove2O08848 Mir698-201ENSMUST00000102164 109 ntBASIC13.42□□□□□ -0.26
Trove2O08848 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
Trove2O08848 Cd63-ps-201ENSMUST00000145417 875 ntBASIC13.42□□□□□ -0.26
Trove2O08848 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
Trove2O08848 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trove2O08848 Gm38114-201ENSMUST00000191877 1232 ntBASIC13.42□□□□□ -0.26
Trove2O08848 Gm43703-201ENSMUST00000200523 763 ntBASIC13.42□□□□□ -0.26
Trove2O08848 Gm44872-201ENSMUST00000207864 420 ntBASIC13.42□□□□□ -0.26
Trove2O08848 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trove2O08848 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trove2O08848 Mir497b-201ENSMUST00000093601 125 ntBASIC13.42□□□□□ -0.26
Trove2O08848 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trove2O08848 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trove2O08848 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC13.42□□□□□ -0.26
Trove2O08848 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trove2O08848 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trove2O08848 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trove2O08848 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC13.42□□□□□ -0.26
Trove2O08848 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trove2O08848 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trove2O08848 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trove2O08848 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC13.42□□□□□ -0.26
Trove2O08848 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
Trove2O08848 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trove2O08848 Matn2-203ENSMUST00000226766 3252 ntBASIC13.42□□□□□ -0.26
Trove2O08848 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trove2O08848 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trove2O08848 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trove2O08848 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trove2O08848 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trove2O08848 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trove2O08848 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trove2O08848 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trove2O08848 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trove2O08848 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trove2O08848 CT573086.2-201ENSMUST00000227277 4992 ntBASIC13.41□□□□□ -0.26
Trove2O08848 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trove2O08848 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trove2O08848 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trove2O08848 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trove2O08848 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC13.41□□□□□ -0.26
Trove2O08848 Gm4204-201ENSMUST00000110798 1231 ntBASIC13.41□□□□□ -0.26
Trove2O08848 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Trove2O08848 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC13.41□□□□□ -0.26
Trove2O08848 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Trove2O08848 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC13.41□□□□□ -0.26
Trove2O08848 Gm9063-201ENSMUST00000223299 582 ntBASIC13.41□□□□□ -0.26
Trove2O08848 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trove2O08848 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
Trove2O08848 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Trove2O08848 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trove2O08848 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trove2O08848 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Trove2O08848 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trove2O08848 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trove2O08848 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC13.41□□□□□ -0.26
Trove2O08848 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trove2O08848 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trove2O08848 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trove2O08848 Tmed9-203ENSMUST00000224741 1450 ntBASIC13.41□□□□□ -0.26
Trove2O08848 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trove2O08848 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trove2O08848 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC13.41□□□□□ -0.26
Trove2O08848 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trove2O08848 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trove2O08848 Rbm8a-206ENSMUST00000200647 2620 ntTSL 2 BASIC13.41□□□□□ -0.26
Trove2O08848 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trove2O08848 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trove2O08848 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trove2O08848 Gm44401-201ENSMUST00000204462 2375 ntBASIC13.4□□□□□ -0.26
Trove2O08848 Gm28323-201ENSMUST00000186817 2499 ntBASIC13.4□□□□□ -0.26
Trove2O08848 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Trove2O08848 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trove2O08848 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trove2O08848 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trove2O08848 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC13.4□□□□□ -0.26
Trove2O08848 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trove2O08848 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trove2O08848 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trove2O08848 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC13.4□□□□□ -0.26
Trove2O08848 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trove2O08848 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trove2O08848 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC13.4□□□□□ -0.26
Trove2O08848 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trove2O08848 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC13.4□□□□□ -0.26
Trove2O08848 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trove2O08848 Gm10766-202ENSMUST00000194123 606 ntBASIC13.4□□□□□ -0.26
Trove2O08848 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 62.7 ms