Protein–RNA interactions for Protein: G3UXB3

Nkx1-1, NK1 homeobox 1, mousemouse

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx1-1G3UXB3 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Nkx1-1G3UXB3 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Nkx1-1G3UXB3 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Nkx1-1G3UXB3 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Nkx1-1G3UXB3 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Nkx1-1G3UXB3 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Nkx1-1G3UXB3 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Nkx1-1G3UXB3 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC15.47■□□□□ 0.07
Nkx1-1G3UXB3 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC15.47■□□□□ 0.07
Nkx1-1G3UXB3 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Nkx1-1G3UXB3 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Nkx1-1G3UXB3 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Nkx1-1G3UXB3 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Nkx1-1G3UXB3 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Nkx1-1G3UXB3 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
Nkx1-1G3UXB3 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Nkx1-1G3UXB3 AC160410.1-201ENSMUST00000219298 1972 ntBASIC15.46■□□□□ 0.07
Nkx1-1G3UXB3 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Nkx1-1G3UXB3 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Nkx1-1G3UXB3 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Nkx1-1G3UXB3 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC15.46■□□□□ 0.07
Nkx1-1G3UXB3 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Nkx1-1G3UXB3 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
Nkx1-1G3UXB3 Gm6335-201ENSMUST00000118081 1194 ntBASIC15.46■□□□□ 0.07
Nkx1-1G3UXB3 Gm7816-201ENSMUST00000119884 1194 ntBASIC15.46■□□□□ 0.07
Nkx1-1G3UXB3 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
Nkx1-1G3UXB3 Gm15542-201ENSMUST00000121585 1194 ntBASIC15.46■□□□□ 0.07
Nkx1-1G3UXB3 Gm12798-201ENSMUST00000124786 666 ntTSL 5 BASIC15.46■□□□□ 0.07
Nkx1-1G3UXB3 Gm15856-201ENSMUST00000124853 1162 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Nkx1-1G3UXB3 Gm16363-201ENSMUST00000132460 877 ntBASIC15.46■□□□□ 0.07
Nkx1-1G3UXB3 Gm42779-201ENSMUST00000198807 406 ntBASIC15.46■□□□□ 0.07
Nkx1-1G3UXB3 1110003F10Rik-201ENSMUST00000199441 767 ntBASIC15.46■□□□□ 0.07
Nkx1-1G3UXB3 Gm43997-201ENSMUST00000203986 1005 ntBASIC15.46■□□□□ 0.07
Nkx1-1G3UXB3 AC158631.2-201ENSMUST00000219999 478 ntBASIC15.46■□□□□ 0.07
Nkx1-1G3UXB3 Gm34237-201ENSMUST00000220575 1257 ntTSL 5 BASIC15.46■□□□□ 0.07
Nkx1-1G3UXB3 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC15.46■□□□□ 0.07
Nkx1-1G3UXB3 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
Nkx1-1G3UXB3 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
Nkx1-1G3UXB3 Gm10179-201ENSMUST00000086233 688 ntBASIC15.46■□□□□ 0.07
Nkx1-1G3UXB3 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Nkx1-1G3UXB3 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Nkx1-1G3UXB3 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Nkx1-1G3UXB3 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Nkx1-1G3UXB3 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Nkx1-1G3UXB3 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC15.45■□□□□ 0.06
Nkx1-1G3UXB3 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Nkx1-1G3UXB3 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Nkx1-1G3UXB3 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Nkx1-1G3UXB3 Gm23270-201ENSMUST00000104055 131 ntBASIC15.45■□□□□ 0.06
Nkx1-1G3UXB3 Olfr800-201ENSMUST00000104903 940 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
Nkx1-1G3UXB3 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Nkx1-1G3UXB3 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Nkx1-1G3UXB3 Gm15057-201ENSMUST00000121516 534 ntBASIC15.45■□□□□ 0.06
Nkx1-1G3UXB3 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Nkx1-1G3UXB3 Gm23777-201ENSMUST00000158994 259 ntBASIC15.45■□□□□ 0.06
Nkx1-1G3UXB3 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Nkx1-1G3UXB3 Gm16308-201ENSMUST00000162171 940 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Nkx1-1G3UXB3 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Nkx1-1G3UXB3 2610020F03Rik-201ENSMUST00000180401 588 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Nkx1-1G3UXB3 Gm28494-201ENSMUST00000187687 562 ntTSL 5 BASIC15.45■□□□□ 0.06
Nkx1-1G3UXB3 Gm8176-201ENSMUST00000191297 1099 ntBASIC15.45■□□□□ 0.06
Nkx1-1G3UXB3 Gm38210-201ENSMUST00000191944 809 ntBASIC15.45■□□□□ 0.06
Nkx1-1G3UXB3 Gm18843-201ENSMUST00000194982 719 ntBASIC15.45■□□□□ 0.06
Nkx1-1G3UXB3 Gm37987-201ENSMUST00000194999 825 ntBASIC15.45■□□□□ 0.06
Nkx1-1G3UXB3 Gm43556-201ENSMUST00000196186 681 ntBASIC15.45■□□□□ 0.06
Nkx1-1G3UXB3 Gm21049-201ENSMUST00000197078 987 ntBASIC15.45■□□□□ 0.06
Nkx1-1G3UXB3 Gm8285-201ENSMUST00000208293 759 ntBASIC15.45■□□□□ 0.06
Nkx1-1G3UXB3 AC164087.1-201ENSMUST00000215174 733 ntTSL 3 BASIC15.45■□□□□ 0.06
Nkx1-1G3UXB3 Gm5178-201ENSMUST00000219380 898 ntBASIC15.45■□□□□ 0.06
Nkx1-1G3UXB3 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Nkx1-1G3UXB3 Mlf1-201ENSMUST00000061322 1113 ntAPPRIS P4 TSL 1 (best) BASIC15.45■□□□□ 0.06
Nkx1-1G3UXB3 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Nkx1-1G3UXB3 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC15.45■□□□□ 0.06
Nkx1-1G3UXB3 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Nkx1-1G3UXB3 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Nkx1-1G3UXB3 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Nkx1-1G3UXB3 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
Nkx1-1G3UXB3 Gm44443-201ENSMUST00000204396 5633 ntBASIC15.45■□□□□ 0.06
Nkx1-1G3UXB3 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Nkx1-1G3UXB3 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Nkx1-1G3UXB3 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Nkx1-1G3UXB3 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Nkx1-1G3UXB3 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Nkx1-1G3UXB3 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Nkx1-1G3UXB3 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Nkx1-1G3UXB3 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC15.44■□□□□ 0.06
Nkx1-1G3UXB3 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC15.44■□□□□ 0.06
Nkx1-1G3UXB3 Lilrb4a-203ENSMUST00000219696 1441 ntAPPRIS P5 TSL 1 (best) BASIC15.44■□□□□ 0.06
Nkx1-1G3UXB3 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Nkx1-1G3UXB3 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Nkx1-1G3UXB3 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Nkx1-1G3UXB3 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Nkx1-1G3UXB3 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Nkx1-1G3UXB3 Gm14021-201ENSMUST00000117683 961 ntBASIC15.44■□□□□ 0.06
Nkx1-1G3UXB3 Gm2231-201ENSMUST00000125661 612 ntBASIC15.44■□□□□ 0.06
Nkx1-1G3UXB3 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC15.44■□□□□ 0.06
Nkx1-1G3UXB3 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC15.44■□□□□ 0.06
Nkx1-1G3UXB3 Gm14902-201ENSMUST00000145576 1007 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Nkx1-1G3UXB3 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Nkx1-1G3UXB3 Anapc16-203ENSMUST00000182152 847 ntTSL 2 BASIC15.44■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 51.7 ms