Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC11.76□□□□□ -0.53
Pcdh1F7BJK1 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdh1F7BJK1 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdh1F7BJK1 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
Pcdh1F7BJK1 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdh1F7BJK1 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdh1F7BJK1 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdh1F7BJK1 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdh1F7BJK1 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdh1F7BJK1 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdh1F7BJK1 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdh1F7BJK1 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdh1F7BJK1 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC11.76□□□□□ -0.53
Pcdh1F7BJK1 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdh1F7BJK1 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdh1F7BJK1 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC11.76□□□□□ -0.53
Pcdh1F7BJK1 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
Pcdh1F7BJK1 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdh1F7BJK1 Gm42790-201ENSMUST00000201268 969 ntBASIC11.76□□□□□ -0.53
Pcdh1F7BJK1 Gm45484-201ENSMUST00000210310 1141 ntBASIC11.76□□□□□ -0.53
Pcdh1F7BJK1 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC11.76□□□□□ -0.53
Pcdh1F7BJK1 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC11.76□□□□□ -0.53
Pcdh1F7BJK1 AC126408.1-201ENSMUST00000225184 523 ntBASIC11.76□□□□□ -0.53
Pcdh1F7BJK1 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdh1F7BJK1 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdh1F7BJK1 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Pcdh1F7BJK1 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdh1F7BJK1 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdh1F7BJK1 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdh1F7BJK1 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdh1F7BJK1 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdh1F7BJK1 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC11.76□□□□□ -0.53
Pcdh1F7BJK1 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdh1F7BJK1 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdh1F7BJK1 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdh1F7BJK1 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdh1F7BJK1 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdh1F7BJK1 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdh1F7BJK1 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC11.76□□□□□ -0.53
Pcdh1F7BJK1 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdh1F7BJK1 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdh1F7BJK1 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdh1F7BJK1 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC11.75□□□□□ -0.53
Pcdh1F7BJK1 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pcdh1F7BJK1 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Pcdh1F7BJK1 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pcdh1F7BJK1 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC11.75□□□□□ -0.53
Pcdh1F7BJK1 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC11.75□□□□□ -0.53
Pcdh1F7BJK1 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Pcdh1F7BJK1 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Pcdh1F7BJK1 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pcdh1F7BJK1 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Pcdh1F7BJK1 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Pcdh1F7BJK1 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
Pcdh1F7BJK1 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Pcdh1F7BJK1 Gm12485-201ENSMUST00000119641 291 ntBASIC11.75□□□□□ -0.53
Pcdh1F7BJK1 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC11.75□□□□□ -0.53
Pcdh1F7BJK1 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC11.75□□□□□ -0.53
Pcdh1F7BJK1 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Pcdh1F7BJK1 Gm9063-201ENSMUST00000223299 582 ntBASIC11.75□□□□□ -0.53
Pcdh1F7BJK1 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pcdh1F7BJK1 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pcdh1F7BJK1 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pcdh1F7BJK1 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pcdh1F7BJK1 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pcdh1F7BJK1 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pcdh1F7BJK1 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC11.75□□□□□ -0.53
Pcdh1F7BJK1 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pcdh1F7BJK1 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC11.75□□□□□ -0.53
Pcdh1F7BJK1 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Pcdh1F7BJK1 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pcdh1F7BJK1 Gm37391-201ENSMUST00000194891 2318 ntBASIC11.75□□□□□ -0.53
Pcdh1F7BJK1 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pcdh1F7BJK1 Mbnl2-204ENSMUST00000227012 2390 ntBASIC11.75□□□□□ -0.53
Pcdh1F7BJK1 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pcdh1F7BJK1 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pcdh1F7BJK1 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pcdh1F7BJK1 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pcdh1F7BJK1 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pcdh1F7BJK1 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Pcdh1F7BJK1 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pcdh1F7BJK1 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pcdh1F7BJK1 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Pcdh1F7BJK1 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC11.74□□□□□ -0.53
Pcdh1F7BJK1 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC11.74□□□□□ -0.53
Pcdh1F7BJK1 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Pcdh1F7BJK1 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Pcdh1F7BJK1 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pcdh1F7BJK1 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pcdh1F7BJK1 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC11.74□□□□□ -0.53
Pcdh1F7BJK1 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pcdh1F7BJK1 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pcdh1F7BJK1 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pcdh1F7BJK1 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Pcdh1F7BJK1 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC11.74□□□□□ -0.53
Pcdh1F7BJK1 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC11.74□□□□□ -0.53
Pcdh1F7BJK1 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Pcdh1F7BJK1 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pcdh1F7BJK1 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pcdh1F7BJK1 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms