Protein–RNA interactions for Protein: B9EHT4

Clip3, CAP-Gly domain-containing linker protein 3, mousemouse

Predictions only

Length 547 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip3B9EHT4 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Clip3B9EHT4 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC12.72□□□□□ -0.37
Clip3B9EHT4 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Clip3B9EHT4 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
Clip3B9EHT4 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Clip3B9EHT4 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC12.72□□□□□ -0.37
Clip3B9EHT4 Gm9124-201ENSMUST00000191789 1092 ntBASIC12.72□□□□□ -0.37
Clip3B9EHT4 Gm9113-201ENSMUST00000192510 1018 ntBASIC12.72□□□□□ -0.37
Clip3B9EHT4 Gm38144-201ENSMUST00000192790 465 ntBASIC12.72□□□□□ -0.37
Clip3B9EHT4 Gm9131-201ENSMUST00000193557 1089 ntBASIC12.72□□□□□ -0.37
Clip3B9EHT4 Gm9121-201ENSMUST00000193749 1071 ntBASIC12.72□□□□□ -0.37
Clip3B9EHT4 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
Clip3B9EHT4 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC12.72□□□□□ -0.37
Clip3B9EHT4 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Clip3B9EHT4 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Clip3B9EHT4 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Clip3B9EHT4 Gm3695-201ENSMUST00000087222 1009 ntBASIC12.72□□□□□ -0.37
Clip3B9EHT4 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Clip3B9EHT4 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Clip3B9EHT4 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Clip3B9EHT4 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Clip3B9EHT4 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Clip3B9EHT4 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Clip3B9EHT4 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Clip3B9EHT4 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Clip3B9EHT4 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Clip3B9EHT4 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Clip3B9EHT4 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC12.71□□□□□ -0.37
Clip3B9EHT4 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Clip3B9EHT4 Gm37133-201ENSMUST00000192705 1922 ntBASIC12.71□□□□□ -0.37
Clip3B9EHT4 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Clip3B9EHT4 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Clip3B9EHT4 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Clip3B9EHT4 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC12.71□□□□□ -0.37
Clip3B9EHT4 Gm12390-201ENSMUST00000117897 397 ntBASIC12.71□□□□□ -0.37
Clip3B9EHT4 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC12.71□□□□□ -0.37
Clip3B9EHT4 Gm11814-201ENSMUST00000119515 929 ntBASIC12.71□□□□□ -0.37
Clip3B9EHT4 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.37
Clip3B9EHT4 Gm6152-201ENSMUST00000151704 340 ntBASIC12.71□□□□□ -0.37
Clip3B9EHT4 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Clip3B9EHT4 Gm8835-201ENSMUST00000173096 1169 ntBASIC12.71□□□□□ -0.37
Clip3B9EHT4 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC12.71□□□□□ -0.37
Clip3B9EHT4 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC12.71□□□□□ -0.37
Clip3B9EHT4 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC12.71□□□□□ -0.37
Clip3B9EHT4 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Clip3B9EHT4 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC12.71□□□□□ -0.37
Clip3B9EHT4 AC125350.2-201ENSMUST00000224737 727 ntBASIC12.71□□□□□ -0.37
Clip3B9EHT4 Itm2b-204ENSMUST00000228637 783 ntBASIC12.71□□□□□ -0.37
Clip3B9EHT4 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Clip3B9EHT4 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Clip3B9EHT4 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Clip3B9EHT4 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Clip3B9EHT4 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Clip3B9EHT4 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Clip3B9EHT4 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Clip3B9EHT4 Hexim1-201ENSMUST00000053063 3495 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Clip3B9EHT4 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Clip3B9EHT4 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Clip3B9EHT4 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Clip3B9EHT4 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Clip3B9EHT4 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Clip3B9EHT4 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
Clip3B9EHT4 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC12.71□□□□□ -0.38
Clip3B9EHT4 Zscan30-202ENSMUST00000224144 1458 ntBASIC12.71□□□□□ -0.38
Clip3B9EHT4 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
Clip3B9EHT4 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Clip3B9EHT4 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Clip3B9EHT4 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Clip3B9EHT4 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Clip3B9EHT4 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
Clip3B9EHT4 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Clip3B9EHT4 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Clip3B9EHT4 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Clip3B9EHT4 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC12.7□□□□□ -0.38
Clip3B9EHT4 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC12.7□□□□□ -0.38
Clip3B9EHT4 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Clip3B9EHT4 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Clip3B9EHT4 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Clip3B9EHT4 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Clip3B9EHT4 Grk6-205ENSMUST00000224653 2976 ntBASIC12.7□□□□□ -0.38
Clip3B9EHT4 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC12.7□□□□□ -0.38
Clip3B9EHT4 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Clip3B9EHT4 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Clip3B9EHT4 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Clip3B9EHT4 Mup-ps23-201ENSMUST00000118063 630 ntBASIC12.7□□□□□ -0.38
Clip3B9EHT4 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Clip3B9EHT4 Gm13612-201ENSMUST00000119276 390 ntBASIC12.7□□□□□ -0.38
Clip3B9EHT4 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC12.7□□□□□ -0.38
Clip3B9EHT4 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC12.7□□□□□ -0.38
Clip3B9EHT4 Mir7085-201ENSMUST00000184353 66 ntBASIC12.7□□□□□ -0.38
Clip3B9EHT4 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC12.7□□□□□ -0.38
Clip3B9EHT4 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Clip3B9EHT4 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Clip3B9EHT4 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Clip3B9EHT4 Gm6091-201ENSMUST00000098307 165 ntBASIC12.7□□□□□ -0.38
Clip3B9EHT4 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Clip3B9EHT4 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Clip3B9EHT4 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC12.7□□□□□ -0.38
Clip3B9EHT4 Gm5639-201ENSMUST00000122305 2403 ntBASIC12.7□□□□□ -0.38
Clip3B9EHT4 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms