Protein–RNA interactions for Protein: B2RQC2

Usp42, Ubiquitin carboxyl-terminal hydrolase 42, mousemouse

Known RBP Predictions only

Length 1,324 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp42B2RQC2 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Usp42B2RQC2 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Usp42B2RQC2 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Usp42B2RQC2 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Usp42B2RQC2 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Usp42B2RQC2 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC15.24■□□□□ 0.03
Usp42B2RQC2 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Usp42B2RQC2 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Usp42B2RQC2 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC15.24■□□□□ 0.03
Usp42B2RQC2 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Usp42B2RQC2 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Usp42B2RQC2 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Usp42B2RQC2 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC15.24■□□□□ 0.03
Usp42B2RQC2 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Usp42B2RQC2 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Usp42B2RQC2 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Usp42B2RQC2 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC15.23■□□□□ 0.03
Usp42B2RQC2 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Usp42B2RQC2 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC15.23■□□□□ 0.03
Usp42B2RQC2 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Usp42B2RQC2 Gm4768-201ENSMUST00000206199 686 ntBASIC15.23■□□□□ 0.03
Usp42B2RQC2 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Usp42B2RQC2 Gm19163-201ENSMUST00000223313 780 ntBASIC15.23■□□□□ 0.03
Usp42B2RQC2 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Usp42B2RQC2 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Usp42B2RQC2 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Usp42B2RQC2 n-R5s77-201ENSMUST00000083757 119 ntBASIC15.23■□□□□ 0.03
Usp42B2RQC2 Gm10268-201ENSMUST00000085340 555 ntBASIC15.23■□□□□ 0.03
Usp42B2RQC2 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC15.23■□□□□ 0.03
Usp42B2RQC2 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC15.23■□□□□ 0.03
Usp42B2RQC2 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Usp42B2RQC2 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
Usp42B2RQC2 Gm8706-201ENSMUST00000197372 1491 ntBASIC15.23■□□□□ 0.03
Usp42B2RQC2 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Usp42B2RQC2 Gm38157-201ENSMUST00000194178 1698 ntBASIC15.23■□□□□ 0.03
Usp42B2RQC2 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Usp42B2RQC2 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Usp42B2RQC2 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Usp42B2RQC2 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Usp42B2RQC2 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Usp42B2RQC2 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
Usp42B2RQC2 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Usp42B2RQC2 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC15.23■□□□□ 0.03
Usp42B2RQC2 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Usp42B2RQC2 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Usp42B2RQC2 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
Usp42B2RQC2 AC154747.3-201ENSMUST00000224471 3470 ntBASIC15.22■□□□□ 0.03
Usp42B2RQC2 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Usp42B2RQC2 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC15.22■□□□□ 0.03
Usp42B2RQC2 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Usp42B2RQC2 Gm15824-201ENSMUST00000119516 955 ntBASIC15.22■□□□□ 0.03
Usp42B2RQC2 Gm45784-201ENSMUST00000188360 142 ntBASIC15.22■□□□□ 0.03
Usp42B2RQC2 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC15.22■□□□□ 0.03
Usp42B2RQC2 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC15.22■□□□□ 0.03
Usp42B2RQC2 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Usp42B2RQC2 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Usp42B2RQC2 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Usp42B2RQC2 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Usp42B2RQC2 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC15.22■□□□□ 0.03
Usp42B2RQC2 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Usp42B2RQC2 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC15.22■□□□□ 0.03
Usp42B2RQC2 Gm3052-202ENSMUST00000188254 2224 ntBASIC15.22■□□□□ 0.03
Usp42B2RQC2 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Usp42B2RQC2 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Usp42B2RQC2 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC15.22■□□□□ 0.03
Usp42B2RQC2 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Usp42B2RQC2 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Usp42B2RQC2 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Usp42B2RQC2 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
Usp42B2RQC2 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Usp42B2RQC2 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Usp42B2RQC2 Gm11425-201ENSMUST00000119608 498 ntBASIC15.21■□□□□ 0.03
Usp42B2RQC2 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Usp42B2RQC2 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Usp42B2RQC2 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Usp42B2RQC2 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Usp42B2RQC2 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Usp42B2RQC2 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC15.21■□□□□ 0.03
Usp42B2RQC2 Gm27731-201ENSMUST00000185192 107 ntBASIC15.21■□□□□ 0.03
Usp42B2RQC2 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC15.21■□□□□ 0.03
Usp42B2RQC2 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Usp42B2RQC2 Gm43416-201ENSMUST00000201916 1015 ntBASIC15.21■□□□□ 0.03
Usp42B2RQC2 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC15.21■□□□□ 0.03
Usp42B2RQC2 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Usp42B2RQC2 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Usp42B2RQC2 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Usp42B2RQC2 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Usp42B2RQC2 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Usp42B2RQC2 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Usp42B2RQC2 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Usp42B2RQC2 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Usp42B2RQC2 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Usp42B2RQC2 Gm9396-201ENSMUST00000076703 567 ntBASIC15.21■□□□□ 0.03
Usp42B2RQC2 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Usp42B2RQC2 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Usp42B2RQC2 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Usp42B2RQC2 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC15.21■□□□□ 0.03
Usp42B2RQC2 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Usp42B2RQC2 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Usp42B2RQC2 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms