Protein–RNA interactions for Protein: Q9QZM3

Clcf1, Cardiotrophin-like cytokine factor 1, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcf1Q9QZM3 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Clcf1Q9QZM3 Gm37861-201ENSMUST00000193534 2869 ntBASIC11.89□□□□□ -0.51
Clcf1Q9QZM3 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Clcf1Q9QZM3 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Clcf1Q9QZM3 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Clcf1Q9QZM3 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Clcf1Q9QZM3 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Clcf1Q9QZM3 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Clcf1Q9QZM3 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Clcf1Q9QZM3 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC11.88□□□□□ -0.51
Clcf1Q9QZM3 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Clcf1Q9QZM3 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Clcf1Q9QZM3 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Clcf1Q9QZM3 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Clcf1Q9QZM3 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Clcf1Q9QZM3 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Clcf1Q9QZM3 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC11.88□□□□□ -0.51
Clcf1Q9QZM3 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Clcf1Q9QZM3 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Clcf1Q9QZM3 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Clcf1Q9QZM3 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Clcf1Q9QZM3 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Clcf1Q9QZM3 Gm10156-201ENSMUST00000122364 462 ntBASIC11.88□□□□□ -0.51
Clcf1Q9QZM3 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC11.88□□□□□ -0.51
Clcf1Q9QZM3 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Clcf1Q9QZM3 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC11.88□□□□□ -0.51
Clcf1Q9QZM3 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Clcf1Q9QZM3 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC11.88□□□□□ -0.51
Clcf1Q9QZM3 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC11.88□□□□□ -0.51
Clcf1Q9QZM3 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Clcf1Q9QZM3 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC11.88□□□□□ -0.51
Clcf1Q9QZM3 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC11.88□□□□□ -0.51
Clcf1Q9QZM3 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Clcf1Q9QZM3 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Clcf1Q9QZM3 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Clcf1Q9QZM3 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Clcf1Q9QZM3 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Clcf1Q9QZM3 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Clcf1Q9QZM3 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Clcf1Q9QZM3 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Clcf1Q9QZM3 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Clcf1Q9QZM3 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Clcf1Q9QZM3 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Clcf1Q9QZM3 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Clcf1Q9QZM3 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Clcf1Q9QZM3 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Clcf1Q9QZM3 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Clcf1Q9QZM3 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Clcf1Q9QZM3 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Clcf1Q9QZM3 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Clcf1Q9QZM3 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
Clcf1Q9QZM3 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Clcf1Q9QZM3 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC11.87□□□□□ -0.51
Clcf1Q9QZM3 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Clcf1Q9QZM3 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Clcf1Q9QZM3 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Clcf1Q9QZM3 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Clcf1Q9QZM3 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Clcf1Q9QZM3 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Clcf1Q9QZM3 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Clcf1Q9QZM3 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Clcf1Q9QZM3 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Clcf1Q9QZM3 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Clcf1Q9QZM3 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Clcf1Q9QZM3 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Clcf1Q9QZM3 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Clcf1Q9QZM3 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC11.87□□□□□ -0.51
Clcf1Q9QZM3 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Clcf1Q9QZM3 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC11.87□□□□□ -0.51
Clcf1Q9QZM3 Gm8810-201ENSMUST00000172895 754 ntBASIC11.87□□□□□ -0.51
Clcf1Q9QZM3 Gm45784-201ENSMUST00000188360 142 ntBASIC11.87□□□□□ -0.51
Clcf1Q9QZM3 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC11.87□□□□□ -0.51
Clcf1Q9QZM3 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC11.87□□□□□ -0.51
Clcf1Q9QZM3 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Clcf1Q9QZM3 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Clcf1Q9QZM3 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Clcf1Q9QZM3 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Clcf1Q9QZM3 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Clcf1Q9QZM3 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Clcf1Q9QZM3 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Clcf1Q9QZM3 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Clcf1Q9QZM3 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Clcf1Q9QZM3 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Clcf1Q9QZM3 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Clcf1Q9QZM3 AC139350.1-201ENSMUST00000227064 1594 ntBASIC11.87□□□□□ -0.51
Clcf1Q9QZM3 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Clcf1Q9QZM3 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Clcf1Q9QZM3 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Clcf1Q9QZM3 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Clcf1Q9QZM3 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Clcf1Q9QZM3 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Clcf1Q9QZM3 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC11.87□□□□□ -0.51
Clcf1Q9QZM3 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Clcf1Q9QZM3 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Clcf1Q9QZM3 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Clcf1Q9QZM3 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Clcf1Q9QZM3 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
Clcf1Q9QZM3 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Clcf1Q9QZM3 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Clcf1Q9QZM3 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 52.4 ms