Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim39Q9ESN2 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC12.28□□□□□ -0.44
Trim39Q9ESN2 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Trim39Q9ESN2 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Trim39Q9ESN2 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim39Q9ESN2 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim39Q9ESN2 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Trim39Q9ESN2 Gm13859-201ENSMUST00000119936 1423 ntBASIC12.28□□□□□ -0.44
Trim39Q9ESN2 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trim39Q9ESN2 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC12.28□□□□□ -0.44
Trim39Q9ESN2 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC12.27□□□□□ -0.44
Trim39Q9ESN2 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trim39Q9ESN2 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trim39Q9ESN2 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trim39Q9ESN2 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trim39Q9ESN2 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trim39Q9ESN2 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
Trim39Q9ESN2 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trim39Q9ESN2 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trim39Q9ESN2 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trim39Q9ESN2 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC12.27□□□□□ -0.44
Trim39Q9ESN2 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
Trim39Q9ESN2 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Trim39Q9ESN2 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Trim39Q9ESN2 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trim39Q9ESN2 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trim39Q9ESN2 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Trim39Q9ESN2 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trim39Q9ESN2 Gm15321-201ENSMUST00000121290 288 ntBASIC12.27□□□□□ -0.45
Trim39Q9ESN2 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC12.27□□□□□ -0.45
Trim39Q9ESN2 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trim39Q9ESN2 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trim39Q9ESN2 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC12.27□□□□□ -0.45
Trim39Q9ESN2 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trim39Q9ESN2 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC12.27□□□□□ -0.45
Trim39Q9ESN2 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trim39Q9ESN2 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Trim39Q9ESN2 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC12.27□□□□□ -0.45
Trim39Q9ESN2 Gm43275-201ENSMUST00000202053 1020 ntBASIC12.27□□□□□ -0.45
Trim39Q9ESN2 Wdyhv1-203ENSMUST00000226889 394 ntBASIC12.27□□□□□ -0.45
Trim39Q9ESN2 Gm9797-201ENSMUST00000052902 613 ntBASIC12.27□□□□□ -0.45
Trim39Q9ESN2 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trim39Q9ESN2 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trim39Q9ESN2 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trim39Q9ESN2 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trim39Q9ESN2 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trim39Q9ESN2 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trim39Q9ESN2 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trim39Q9ESN2 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trim39Q9ESN2 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Trim39Q9ESN2 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trim39Q9ESN2 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trim39Q9ESN2 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trim39Q9ESN2 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trim39Q9ESN2 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim39Q9ESN2 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Trim39Q9ESN2 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trim39Q9ESN2 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trim39Q9ESN2 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim39Q9ESN2 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Trim39Q9ESN2 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim39Q9ESN2 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim39Q9ESN2 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trim39Q9ESN2 AC168058.1-201ENSMUST00000219521 2282 ntBASIC12.26□□□□□ -0.45
Trim39Q9ESN2 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trim39Q9ESN2 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim39Q9ESN2 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim39Q9ESN2 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trim39Q9ESN2 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC12.26□□□□□ -0.45
Trim39Q9ESN2 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim39Q9ESN2 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim39Q9ESN2 Gm21854-201ENSMUST00000179901 471 ntBASIC12.26□□□□□ -0.45
Trim39Q9ESN2 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Trim39Q9ESN2 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trim39Q9ESN2 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC12.26□□□□□ -0.45
Trim39Q9ESN2 AC125117.2-201ENSMUST00000228344 1140 ntBASIC12.26□□□□□ -0.45
Trim39Q9ESN2 Olfr293-201ENSMUST00000081474 1011 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Trim39Q9ESN2 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Trim39Q9ESN2 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC12.26□□□□□ -0.45
Trim39Q9ESN2 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim39Q9ESN2 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trim39Q9ESN2 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trim39Q9ESN2 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC12.26□□□□□ -0.45
Trim39Q9ESN2 Gm14752-201ENSMUST00000120719 2075 ntBASIC12.26□□□□□ -0.45
Trim39Q9ESN2 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim39Q9ESN2 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Trim39Q9ESN2 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim39Q9ESN2 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim39Q9ESN2 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim39Q9ESN2 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
Trim39Q9ESN2 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim39Q9ESN2 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trim39Q9ESN2 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trim39Q9ESN2 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Trim39Q9ESN2 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim39Q9ESN2 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Trim39Q9ESN2 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim39Q9ESN2 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trim39Q9ESN2 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim39Q9ESN2 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms