Protein–RNA interactions for Protein: Q9DCB1

Hmgn3, High mobility group nucleosome-binding domain-containing protein 3, mousemouse

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn3Q9DCB1 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hmgn3Q9DCB1 Gm8000-201ENSMUST00000188378 592 ntBASIC12.26□□□□□ -0.45
Hmgn3Q9DCB1 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
Hmgn3Q9DCB1 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hmgn3Q9DCB1 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hmgn3Q9DCB1 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hmgn3Q9DCB1 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
Hmgn3Q9DCB1 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Hmgn3Q9DCB1 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hmgn3Q9DCB1 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Hmgn3Q9DCB1 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hmgn3Q9DCB1 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Hmgn3Q9DCB1 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Hmgn3Q9DCB1 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hmgn3Q9DCB1 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC12.26□□□□□ -0.45
Hmgn3Q9DCB1 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hmgn3Q9DCB1 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hmgn3Q9DCB1 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC12.26□□□□□ -0.45
Hmgn3Q9DCB1 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Hmgn3Q9DCB1 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Hmgn3Q9DCB1 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Hmgn3Q9DCB1 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Hmgn3Q9DCB1 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC12.26□□□□□ -0.45
Hmgn3Q9DCB1 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Hmgn3Q9DCB1 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hmgn3Q9DCB1 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hmgn3Q9DCB1 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC12.25□□□□□ -0.45
Hmgn3Q9DCB1 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
Hmgn3Q9DCB1 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hmgn3Q9DCB1 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hmgn3Q9DCB1 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hmgn3Q9DCB1 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Hmgn3Q9DCB1 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Hmgn3Q9DCB1 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hmgn3Q9DCB1 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hmgn3Q9DCB1 Gm44086-201ENSMUST00000203251 2349 ntBASIC12.25□□□□□ -0.45
Hmgn3Q9DCB1 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hmgn3Q9DCB1 Gm6161-201ENSMUST00000121942 1102 ntBASIC12.25□□□□□ -0.45
Hmgn3Q9DCB1 Gm25911-201ENSMUST00000157621 56 ntBASIC12.25□□□□□ -0.45
Hmgn3Q9DCB1 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Hmgn3Q9DCB1 Gm6254-201ENSMUST00000168178 1072 ntBASIC12.25□□□□□ -0.45
Hmgn3Q9DCB1 Gm6153-201ENSMUST00000172004 1058 ntBASIC12.25□□□□□ -0.45
Hmgn3Q9DCB1 Gm24420-201ENSMUST00000176676 59 ntBASIC12.25□□□□□ -0.45
Hmgn3Q9DCB1 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Hmgn3Q9DCB1 Gm27390-201ENSMUST00000184516 176 ntBASIC12.25□□□□□ -0.45
Hmgn3Q9DCB1 Gm7063-201ENSMUST00000186840 981 ntBASIC12.25□□□□□ -0.45
Hmgn3Q9DCB1 Gm38225-201ENSMUST00000194001 393 ntBASIC12.25□□□□□ -0.45
Hmgn3Q9DCB1 Gm5641-202ENSMUST00000198699 1080 ntBASIC12.25□□□□□ -0.45
Hmgn3Q9DCB1 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC12.25□□□□□ -0.45
Hmgn3Q9DCB1 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC12.25□□□□□ -0.45
Hmgn3Q9DCB1 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC12.25□□□□□ -0.45
Hmgn3Q9DCB1 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC12.25□□□□□ -0.45
Hmgn3Q9DCB1 AC155252.2-201ENSMUST00000226946 680 ntBASIC12.25□□□□□ -0.45
Hmgn3Q9DCB1 CT573086.1-201ENSMUST00000227202 1074 ntBASIC12.25□□□□□ -0.45
Hmgn3Q9DCB1 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hmgn3Q9DCB1 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hmgn3Q9DCB1 Gm15500-202ENSMUST00000071641 1019 ntBASIC12.25□□□□□ -0.45
Hmgn3Q9DCB1 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC12.25□□□□□ -0.45
Hmgn3Q9DCB1 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hmgn3Q9DCB1 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Hmgn3Q9DCB1 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC12.25□□□□□ -0.45
Hmgn3Q9DCB1 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hmgn3Q9DCB1 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC12.25□□□□□ -0.45
Hmgn3Q9DCB1 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hmgn3Q9DCB1 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hmgn3Q9DCB1 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
Hmgn3Q9DCB1 Arhgef3-204ENSMUST00000225949 3198 ntBASIC12.25□□□□□ -0.45
Hmgn3Q9DCB1 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hmgn3Q9DCB1 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
Hmgn3Q9DCB1 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hmgn3Q9DCB1 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hmgn3Q9DCB1 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Hmgn3Q9DCB1 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hmgn3Q9DCB1 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Hmgn3Q9DCB1 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Hmgn3Q9DCB1 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Hmgn3Q9DCB1 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hmgn3Q9DCB1 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Hmgn3Q9DCB1 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Hmgn3Q9DCB1 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Hmgn3Q9DCB1 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hmgn3Q9DCB1 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hmgn3Q9DCB1 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hmgn3Q9DCB1 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hmgn3Q9DCB1 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hmgn3Q9DCB1 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hmgn3Q9DCB1 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Hmgn3Q9DCB1 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Hmgn3Q9DCB1 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hmgn3Q9DCB1 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hmgn3Q9DCB1 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Hmgn3Q9DCB1 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hmgn3Q9DCB1 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hmgn3Q9DCB1 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hmgn3Q9DCB1 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hmgn3Q9DCB1 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hmgn3Q9DCB1 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hmgn3Q9DCB1 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Hmgn3Q9DCB1 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC12.24□□□□□ -0.45
Hmgn3Q9DCB1 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 57.7 ms