Protein–RNA interactions for Protein: Q9CY50

Ssr1, Translocon-associated protein subunit alpha, mousemouse

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1Q9CY50 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
Ssr1Q9CY50 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ssr1Q9CY50 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC14.26□□□□□ -0.13
Ssr1Q9CY50 Gm27772-201ENSMUST00000184900 187 ntBASIC14.26□□□□□ -0.13
Ssr1Q9CY50 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC14.26□□□□□ -0.13
Ssr1Q9CY50 Gm7899-201ENSMUST00000192935 1897 ntBASIC14.26□□□□□ -0.13
Ssr1Q9CY50 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ssr1Q9CY50 CT025678.1-201ENSMUST00000214795 2972 ntBASIC14.26□□□□□ -0.13
Ssr1Q9CY50 Gm28719-201ENSMUST00000187779 1757 ntBASIC14.26□□□□□ -0.13
Ssr1Q9CY50 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Ssr1Q9CY50 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
Ssr1Q9CY50 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ssr1Q9CY50 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ssr1Q9CY50 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ssr1Q9CY50 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Ssr1Q9CY50 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ssr1Q9CY50 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC14.25□□□□□ -0.13
Ssr1Q9CY50 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ssr1Q9CY50 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ssr1Q9CY50 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ssr1Q9CY50 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ssr1Q9CY50 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC14.25□□□□□ -0.13
Ssr1Q9CY50 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Ssr1Q9CY50 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ssr1Q9CY50 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Ssr1Q9CY50 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ssr1Q9CY50 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ssr1Q9CY50 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ssr1Q9CY50 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC14.25□□□□□ -0.13
Ssr1Q9CY50 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ssr1Q9CY50 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC14.25□□□□□ -0.13
Ssr1Q9CY50 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ssr1Q9CY50 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC14.25□□□□□ -0.13
Ssr1Q9CY50 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ssr1Q9CY50 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ssr1Q9CY50 AC154621.1-201ENSMUST00000226155 1119 ntBASIC14.25□□□□□ -0.13
Ssr1Q9CY50 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ssr1Q9CY50 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ssr1Q9CY50 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ssr1Q9CY50 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ssr1Q9CY50 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ssr1Q9CY50 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Ssr1Q9CY50 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Ssr1Q9CY50 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ssr1Q9CY50 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ssr1Q9CY50 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ssr1Q9CY50 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ssr1Q9CY50 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Ssr1Q9CY50 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
Ssr1Q9CY50 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ssr1Q9CY50 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Ssr1Q9CY50 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ssr1Q9CY50 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ssr1Q9CY50 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ssr1Q9CY50 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ssr1Q9CY50 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Ssr1Q9CY50 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ssr1Q9CY50 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ssr1Q9CY50 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ssr1Q9CY50 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ssr1Q9CY50 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ssr1Q9CY50 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ssr1Q9CY50 Gm5124-202ENSMUST00000132683 2083 ntBASIC14.24□□□□□ -0.13
Ssr1Q9CY50 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ssr1Q9CY50 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ssr1Q9CY50 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ssr1Q9CY50 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ssr1Q9CY50 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ssr1Q9CY50 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ssr1Q9CY50 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ssr1Q9CY50 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ssr1Q9CY50 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ssr1Q9CY50 Gm12151-201ENSMUST00000121374 290 ntBASIC14.24□□□□□ -0.13
Ssr1Q9CY50 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC14.24□□□□□ -0.13
Ssr1Q9CY50 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
Ssr1Q9CY50 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ssr1Q9CY50 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC14.24□□□□□ -0.13
Ssr1Q9CY50 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ssr1Q9CY50 Gm20445-201ENSMUST00000061905 565 ntBASIC14.24□□□□□ -0.13
Ssr1Q9CY50 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Ssr1Q9CY50 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ssr1Q9CY50 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Ssr1Q9CY50 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC14.24□□□□□ -0.13
Ssr1Q9CY50 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ssr1Q9CY50 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC14.24□□□□□ -0.13
Ssr1Q9CY50 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC14.24□□□□□ -0.13
Ssr1Q9CY50 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ssr1Q9CY50 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ssr1Q9CY50 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ssr1Q9CY50 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ssr1Q9CY50 Gm43423-201ENSMUST00000198390 2094 ntBASIC14.24□□□□□ -0.13
Ssr1Q9CY50 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ssr1Q9CY50 Tmed9-203ENSMUST00000224741 1450 ntBASIC14.24□□□□□ -0.13
Ssr1Q9CY50 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ssr1Q9CY50 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ssr1Q9CY50 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ssr1Q9CY50 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ssr1Q9CY50 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ssr1Q9CY50 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ssr1Q9CY50 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms