Protein–RNA interactions for Protein: Q9CWM4

Pfdn1, Prefoldin subunit 1, mousemouse

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn1Q9CWM4 Gm10355-201ENSMUST00000097146 517 ntBASIC11.43□□□□□ -0.58
Pfdn1Q9CWM4 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Pfdn1Q9CWM4 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC11.43□□□□□ -0.58
Pfdn1Q9CWM4 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Pfdn1Q9CWM4 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Pfdn1Q9CWM4 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Pfdn1Q9CWM4 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Pfdn1Q9CWM4 Kif1a-203ENSMUST00000171556 5391 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Pfdn1Q9CWM4 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC11.43□□□□□ -0.58
Pfdn1Q9CWM4 Agrn-203ENSMUST00000105575 7262 ntTSL 5 BASIC11.43□□□□□ -0.58
Pfdn1Q9CWM4 Arfgap2-201ENSMUST00000028691 2791 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Pfdn1Q9CWM4 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Pfdn1Q9CWM4 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Pfdn1Q9CWM4 Fam26e-201ENSMUST00000069125 5323 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Pfdn1Q9CWM4 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Pfdn1Q9CWM4 Gm13233-201ENSMUST00000118760 1443 ntBASIC11.43□□□□□ -0.58
Pfdn1Q9CWM4 Gm13244-201ENSMUST00000118855 1446 ntBASIC11.43□□□□□ -0.58
Pfdn1Q9CWM4 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC11.43□□□□□ -0.58
Pfdn1Q9CWM4 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Pfdn1Q9CWM4 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Pfdn1Q9CWM4 Gm15459-201ENSMUST00000117405 1941 ntBASIC11.43□□□□□ -0.58
Pfdn1Q9CWM4 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Pfdn1Q9CWM4 Gm8355-201ENSMUST00000177767 1941 ntBASIC11.43□□□□□ -0.58
Pfdn1Q9CWM4 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pfdn1Q9CWM4 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Pfdn1Q9CWM4 Gm44401-201ENSMUST00000204462 2375 ntBASIC11.42□□□□□ -0.58
Pfdn1Q9CWM4 Dis3l-201ENSMUST00000068367 3605 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Pfdn1Q9CWM4 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pfdn1Q9CWM4 Col6a3-202ENSMUST00000097653 9001 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Pfdn1Q9CWM4 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pfdn1Q9CWM4 Pdcd11-201ENSMUST00000072141 6041 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pfdn1Q9CWM4 Vcan-202ENSMUST00000109544 5702 ntTSL 5 BASIC11.42□□□□□ -0.58
Pfdn1Q9CWM4 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Pfdn1Q9CWM4 Pcdhga10-201ENSMUST00000193404 4732 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pfdn1Q9CWM4 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pfdn1Q9CWM4 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Pfdn1Q9CWM4 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pfdn1Q9CWM4 Slc6a2-201ENSMUST00000072939 6187 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pfdn1Q9CWM4 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pfdn1Q9CWM4 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pfdn1Q9CWM4 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC11.42□□□□□ -0.58
Pfdn1Q9CWM4 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pfdn1Q9CWM4 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Pfdn1Q9CWM4 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC11.42□□□□□ -0.58
Pfdn1Q9CWM4 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Pfdn1Q9CWM4 Gm5682-201ENSMUST00000173402 505 ntBASIC11.42□□□□□ -0.58
Pfdn1Q9CWM4 Gm44608-201ENSMUST00000206827 855 ntBASIC11.42□□□□□ -0.58
Pfdn1Q9CWM4 AC153881.2-201ENSMUST00000214877 204 ntBASIC11.42□□□□□ -0.58
Pfdn1Q9CWM4 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Pfdn1Q9CWM4 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pfdn1Q9CWM4 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pfdn1Q9CWM4 Galr1-201ENSMUST00000065224 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pfdn1Q9CWM4 Tubgcp6-201ENSMUST00000041656 5357 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Pfdn1Q9CWM4 Zfp629-202ENSMUST00000084564 5829 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pfdn1Q9CWM4 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pfdn1Q9CWM4 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pfdn1Q9CWM4 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Pfdn1Q9CWM4 Pde6b-201ENSMUST00000031456 2799 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pfdn1Q9CWM4 Gm37500-201ENSMUST00000192059 1443 ntBASIC11.42□□□□□ -0.58
Pfdn1Q9CWM4 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pfdn1Q9CWM4 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Pfdn1Q9CWM4 Dcaf17-209ENSMUST00000154704 7739 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pfdn1Q9CWM4 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pfdn1Q9CWM4 Trp53inp2-201ENSMUST00000043237 3979 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pfdn1Q9CWM4 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Pfdn1Q9CWM4 Slitrk3-202ENSMUST00000192477 4592 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pfdn1Q9CWM4 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pfdn1Q9CWM4 Slc38a8-201ENSMUST00000036748 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pfdn1Q9CWM4 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pfdn1Q9CWM4 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC11.41□□□□□ -0.58
Pfdn1Q9CWM4 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pfdn1Q9CWM4 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pfdn1Q9CWM4 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pfdn1Q9CWM4 P2ry1-201ENSMUST00000029331 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pfdn1Q9CWM4 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pfdn1Q9CWM4 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pfdn1Q9CWM4 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pfdn1Q9CWM4 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Pfdn1Q9CWM4 Gm6433-201ENSMUST00000118634 875 ntBASIC11.41□□□□□ -0.58
Pfdn1Q9CWM4 Gm12644-201ENSMUST00000119935 606 ntBASIC11.41□□□□□ -0.58
Pfdn1Q9CWM4 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC11.41□□□□□ -0.58
Pfdn1Q9CWM4 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC11.41□□□□□ -0.58
Pfdn1Q9CWM4 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC11.41□□□□□ -0.58
Pfdn1Q9CWM4 Gm16026-204ENSMUST00000162652 683 ntBASIC11.41□□□□□ -0.58
Pfdn1Q9CWM4 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Pfdn1Q9CWM4 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC11.41□□□□□ -0.58
Pfdn1Q9CWM4 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Pfdn1Q9CWM4 Gm29741-201ENSMUST00000192667 421 ntBASIC11.41□□□□□ -0.58
Pfdn1Q9CWM4 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC11.41□□□□□ -0.58
Pfdn1Q9CWM4 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Pfdn1Q9CWM4 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pfdn1Q9CWM4 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pfdn1Q9CWM4 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pfdn1Q9CWM4 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pfdn1Q9CWM4 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC11.41□□□□□ -0.58
Pfdn1Q9CWM4 Mon2-201ENSMUST00000037557 5511 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pfdn1Q9CWM4 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Pfdn1Q9CWM4 Ptprh-201ENSMUST00000049113 3495 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pfdn1Q9CWM4 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Pfdn1Q9CWM4 Scn10a-202ENSMUST00000213392 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 46.8 ms