Protein–RNA interactions for Protein: Q99PV0

Prpf8, Pre-mRNA-processing-splicing factor 8, mousemouse

Known RBP Predictions only

Length 2,335 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf8Q99PV0 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Prpf8Q99PV0 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Prpf8Q99PV0 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Prpf8Q99PV0 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Prpf8Q99PV0 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Prpf8Q99PV0 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Prpf8Q99PV0 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Prpf8Q99PV0 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC10.72□□□□□ -0.69
Prpf8Q99PV0 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC10.72□□□□□ -0.69
Prpf8Q99PV0 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Prpf8Q99PV0 Gm17376-201ENSMUST00000166016 84 ntBASIC10.72□□□□□ -0.69
Prpf8Q99PV0 Gm2383-201ENSMUST00000181461 807 ntBASIC10.72□□□□□ -0.69
Prpf8Q99PV0 Gm5896-201ENSMUST00000189662 1024 ntBASIC10.72□□□□□ -0.69
Prpf8Q99PV0 Gm10608-202ENSMUST00000213924 676 ntBASIC10.72□□□□□ -0.69
Prpf8Q99PV0 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Prpf8Q99PV0 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Prpf8Q99PV0 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC10.72□□□□□ -0.69
Prpf8Q99PV0 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Prpf8Q99PV0 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Prpf8Q99PV0 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Prpf8Q99PV0 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Prpf8Q99PV0 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Prpf8Q99PV0 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Prpf8Q99PV0 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC10.72□□□□□ -0.69
Prpf8Q99PV0 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Prpf8Q99PV0 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Prpf8Q99PV0 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Prpf8Q99PV0 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Prpf8Q99PV0 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Prpf8Q99PV0 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC10.72□□□□□ -0.69
Prpf8Q99PV0 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC10.72□□□□□ -0.69
Prpf8Q99PV0 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Prpf8Q99PV0 Gm10434-201ENSMUST00000101158 471 ntBASIC10.72□□□□□ -0.69
Prpf8Q99PV0 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Prpf8Q99PV0 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Prpf8Q99PV0 Gm15370-201ENSMUST00000117158 253 ntBASIC10.72□□□□□ -0.69
Prpf8Q99PV0 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Prpf8Q99PV0 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Prpf8Q99PV0 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC10.72□□□□□ -0.69
Prpf8Q99PV0 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC10.72□□□□□ -0.69
Prpf8Q99PV0 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Prpf8Q99PV0 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC10.72□□□□□ -0.69
Prpf8Q99PV0 AC134254.1-201ENSMUST00000221362 167 ntBASIC10.72□□□□□ -0.69
Prpf8Q99PV0 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Prpf8Q99PV0 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Prpf8Q99PV0 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Prpf8Q99PV0 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Prpf8Q99PV0 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Prpf8Q99PV0 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC10.72□□□□□ -0.69
Prpf8Q99PV0 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
Prpf8Q99PV0 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Prpf8Q99PV0 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
Prpf8Q99PV0 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Prpf8Q99PV0 Gm15897-201ENSMUST00000117770 1486 ntBASIC10.71□□□□□ -0.69
Prpf8Q99PV0 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Prpf8Q99PV0 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Prpf8Q99PV0 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
Prpf8Q99PV0 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Prpf8Q99PV0 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Prpf8Q99PV0 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Prpf8Q99PV0 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
Prpf8Q99PV0 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Prpf8Q99PV0 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Prpf8Q99PV0 Gm2231-201ENSMUST00000125661 612 ntBASIC10.71□□□□□ -0.69
Prpf8Q99PV0 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC10.71□□□□□ -0.69
Prpf8Q99PV0 Gm37489-201ENSMUST00000191883 159 ntBASIC10.71□□□□□ -0.69
Prpf8Q99PV0 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC10.71□□□□□ -0.69
Prpf8Q99PV0 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Prpf8Q99PV0 Gm8227-201ENSMUST00000223306 571 ntBASIC10.71□□□□□ -0.69
Prpf8Q99PV0 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Prpf8Q99PV0 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Prpf8Q99PV0 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
Prpf8Q99PV0 Gm7899-201ENSMUST00000192935 1897 ntBASIC10.71□□□□□ -0.69
Prpf8Q99PV0 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Prpf8Q99PV0 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Prpf8Q99PV0 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
Prpf8Q99PV0 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Prpf8Q99PV0 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Prpf8Q99PV0 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
Prpf8Q99PV0 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Prpf8Q99PV0 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.7
Prpf8Q99PV0 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC10.71□□□□□ -0.7
Prpf8Q99PV0 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC10.71□□□□□ -0.7
Prpf8Q99PV0 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Prpf8Q99PV0 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Prpf8Q99PV0 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC10.71□□□□□ -0.7
Prpf8Q99PV0 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Prpf8Q99PV0 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Prpf8Q99PV0 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Prpf8Q99PV0 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Prpf8Q99PV0 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC10.7□□□□□ -0.7
Prpf8Q99PV0 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC10.7□□□□□ -0.7
Prpf8Q99PV0 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Prpf8Q99PV0 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Prpf8Q99PV0 Gm26185-201ENSMUST00000157692 266 ntBASIC10.7□□□□□ -0.7
Prpf8Q99PV0 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Prpf8Q99PV0 Nsd1-205ENSMUST00000224693 852 ntBASIC10.7□□□□□ -0.7
Prpf8Q99PV0 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Prpf8Q99PV0 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC10.7□□□□□ -0.7
Prpf8Q99PV0 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms