Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim8Q99PJ2 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim8Q99PJ2 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC12.84□□□□□ -0.35
Trim8Q99PJ2 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim8Q99PJ2 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim8Q99PJ2 Gm14767-201ENSMUST00000121559 586 ntBASIC12.84□□□□□ -0.35
Trim8Q99PJ2 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC12.84□□□□□ -0.35
Trim8Q99PJ2 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC12.84□□□□□ -0.35
Trim8Q99PJ2 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim8Q99PJ2 Gm29608-201ENSMUST00000190444 463 ntBASIC12.84□□□□□ -0.35
Trim8Q99PJ2 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC12.84□□□□□ -0.35
Trim8Q99PJ2 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Trim8Q99PJ2 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC12.84□□□□□ -0.35
Trim8Q99PJ2 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim8Q99PJ2 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC12.84□□□□□ -0.35
Trim8Q99PJ2 Nudt18-202ENSMUST00000228554 3619 ntBASIC12.84□□□□□ -0.35
Trim8Q99PJ2 Gm45643-201ENSMUST00000211364 1484 ntBASIC12.84□□□□□ -0.35
Trim8Q99PJ2 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim8Q99PJ2 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim8Q99PJ2 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim8Q99PJ2 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Trim8Q99PJ2 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim8Q99PJ2 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Trim8Q99PJ2 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Trim8Q99PJ2 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Trim8Q99PJ2 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC12.83□□□□□ -0.35
Trim8Q99PJ2 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Trim8Q99PJ2 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim8Q99PJ2 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim8Q99PJ2 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim8Q99PJ2 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim8Q99PJ2 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Trim8Q99PJ2 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim8Q99PJ2 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Trim8Q99PJ2 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim8Q99PJ2 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trim8Q99PJ2 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim8Q99PJ2 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim8Q99PJ2 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim8Q99PJ2 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim8Q99PJ2 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim8Q99PJ2 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC12.83□□□□□ -0.36
Trim8Q99PJ2 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim8Q99PJ2 Gm4204-201ENSMUST00000110798 1231 ntBASIC12.83□□□□□ -0.36
Trim8Q99PJ2 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim8Q99PJ2 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trim8Q99PJ2 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trim8Q99PJ2 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trim8Q99PJ2 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC12.83□□□□□ -0.36
Trim8Q99PJ2 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC12.83□□□□□ -0.36
Trim8Q99PJ2 Gm5425-201ENSMUST00000214125 459 ntBASIC12.83□□□□□ -0.36
Trim8Q99PJ2 Gm17795-201ENSMUST00000214505 757 ntBASIC12.83□□□□□ -0.36
Trim8Q99PJ2 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC12.83□□□□□ -0.36
Trim8Q99PJ2 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim8Q99PJ2 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim8Q99PJ2 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim8Q99PJ2 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC12.83□□□□□ -0.36
Trim8Q99PJ2 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trim8Q99PJ2 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim8Q99PJ2 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim8Q99PJ2 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim8Q99PJ2 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim8Q99PJ2 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Trim8Q99PJ2 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim8Q99PJ2 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim8Q99PJ2 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim8Q99PJ2 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Trim8Q99PJ2 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
Trim8Q99PJ2 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim8Q99PJ2 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim8Q99PJ2 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim8Q99PJ2 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim8Q99PJ2 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim8Q99PJ2 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim8Q99PJ2 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim8Q99PJ2 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trim8Q99PJ2 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim8Q99PJ2 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim8Q99PJ2 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim8Q99PJ2 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Trim8Q99PJ2 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim8Q99PJ2 Mir874-201ENSMUST00000104769 76 ntBASIC12.82□□□□□ -0.36
Trim8Q99PJ2 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC12.82□□□□□ -0.36
Trim8Q99PJ2 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC12.82□□□□□ -0.36
Trim8Q99PJ2 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim8Q99PJ2 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC12.82□□□□□ -0.36
Trim8Q99PJ2 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Trim8Q99PJ2 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC12.82□□□□□ -0.36
Trim8Q99PJ2 Gm17330-201ENSMUST00000221047 165 ntBASIC12.82□□□□□ -0.36
Trim8Q99PJ2 Gm9063-201ENSMUST00000223299 582 ntBASIC12.82□□□□□ -0.36
Trim8Q99PJ2 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Trim8Q99PJ2 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim8Q99PJ2 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim8Q99PJ2 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim8Q99PJ2 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim8Q99PJ2 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim8Q99PJ2 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim8Q99PJ2 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Trim8Q99PJ2 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Trim8Q99PJ2 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms