Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Scrt1Q99M85 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Scrt1Q99M85 Gm14752-201ENSMUST00000120719 2075 ntBASIC11.48□□□□□ -0.57
Scrt1Q99M85 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Scrt1Q99M85 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Scrt1Q99M85 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Scrt1Q99M85 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC11.48□□□□□ -0.57
Scrt1Q99M85 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Scrt1Q99M85 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Scrt1Q99M85 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Scrt1Q99M85 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC11.48□□□□□ -0.57
Scrt1Q99M85 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC11.48□□□□□ -0.57
Scrt1Q99M85 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Scrt1Q99M85 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Scrt1Q99M85 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC11.48□□□□□ -0.57
Scrt1Q99M85 Gm16505-201ENSMUST00000179981 232 ntBASIC11.48□□□□□ -0.57
Scrt1Q99M85 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Scrt1Q99M85 Gm5363-201ENSMUST00000211927 938 ntBASIC11.48□□□□□ -0.57
Scrt1Q99M85 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Scrt1Q99M85 Gm4935-201ENSMUST00000221316 1198 ntBASIC11.48□□□□□ -0.57
Scrt1Q99M85 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Scrt1Q99M85 Gm2824-203ENSMUST00000226189 1228 ntBASIC11.48□□□□□ -0.57
Scrt1Q99M85 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Scrt1Q99M85 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Scrt1Q99M85 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Scrt1Q99M85 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Scrt1Q99M85 AC113441.2-201ENSMUST00000221538 1468 ntBASIC11.48□□□□□ -0.57
Scrt1Q99M85 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Scrt1Q99M85 Gm7899-201ENSMUST00000192935 1897 ntBASIC11.48□□□□□ -0.57
Scrt1Q99M85 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC11.48□□□□□ -0.57
Scrt1Q99M85 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Scrt1Q99M85 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Scrt1Q99M85 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Scrt1Q99M85 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Scrt1Q99M85 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Scrt1Q99M85 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Scrt1Q99M85 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Scrt1Q99M85 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Scrt1Q99M85 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Scrt1Q99M85 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Scrt1Q99M85 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC11.48□□□□□ -0.57
Scrt1Q99M85 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Scrt1Q99M85 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC11.47□□□□□ -0.57
Scrt1Q99M85 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Scrt1Q99M85 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Scrt1Q99M85 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Scrt1Q99M85 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Scrt1Q99M85 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC11.47□□□□□ -0.57
Scrt1Q99M85 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Scrt1Q99M85 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Scrt1Q99M85 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Scrt1Q99M85 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Scrt1Q99M85 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Scrt1Q99M85 Gm15889-202ENSMUST00000212669 2443 ntBASIC11.47□□□□□ -0.57
Scrt1Q99M85 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Scrt1Q99M85 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Scrt1Q99M85 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Scrt1Q99M85 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Scrt1Q99M85 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC11.47□□□□□ -0.57
Scrt1Q99M85 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC11.47□□□□□ -0.57
Scrt1Q99M85 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Scrt1Q99M85 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Scrt1Q99M85 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Scrt1Q99M85 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Scrt1Q99M85 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC11.47□□□□□ -0.57
Scrt1Q99M85 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Scrt1Q99M85 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Scrt1Q99M85 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Scrt1Q99M85 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Scrt1Q99M85 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC11.47□□□□□ -0.57
Scrt1Q99M85 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Scrt1Q99M85 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Scrt1Q99M85 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Scrt1Q99M85 Gm6023-201ENSMUST00000118217 606 ntBASIC11.47□□□□□ -0.57
Scrt1Q99M85 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Scrt1Q99M85 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Scrt1Q99M85 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC11.47□□□□□ -0.57
Scrt1Q99M85 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Scrt1Q99M85 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Scrt1Q99M85 Gm37489-201ENSMUST00000191883 159 ntBASIC11.47□□□□□ -0.57
Scrt1Q99M85 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Scrt1Q99M85 Gm43138-201ENSMUST00000199123 708 ntBASIC11.47□□□□□ -0.57
Scrt1Q99M85 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC11.47□□□□□ -0.57
Scrt1Q99M85 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC11.47□□□□□ -0.57
Scrt1Q99M85 Gm17870-201ENSMUST00000219489 1174 ntBASIC11.47□□□□□ -0.57
Scrt1Q99M85 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC11.47□□□□□ -0.57
Scrt1Q99M85 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Scrt1Q99M85 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Scrt1Q99M85 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Scrt1Q99M85 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Scrt1Q99M85 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Scrt1Q99M85 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Scrt1Q99M85 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC11.47□□□□□ -0.57
Scrt1Q99M85 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Scrt1Q99M85 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC11.47□□□□□ -0.57
Scrt1Q99M85 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Scrt1Q99M85 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Scrt1Q99M85 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC11.47□□□□□ -0.57
Scrt1Q99M85 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Scrt1Q99M85 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms