Protein–RNA interactions for Protein: Q99JW4

Lims1, LIM and senescent cell antigen-like-containing domain protein 1, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lims1Q99JW4 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Lims1Q99JW4 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Lims1Q99JW4 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Lims1Q99JW4 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Lims1Q99JW4 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Lims1Q99JW4 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC11.93□□□□□ -0.5
Lims1Q99JW4 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Lims1Q99JW4 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Lims1Q99JW4 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC11.93□□□□□ -0.5
Lims1Q99JW4 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Lims1Q99JW4 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Lims1Q99JW4 Gm28760-201ENSMUST00000185995 736 ntBASIC11.93□□□□□ -0.5
Lims1Q99JW4 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Lims1Q99JW4 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Lims1Q99JW4 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC11.93□□□□□ -0.5
Lims1Q99JW4 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Lims1Q99JW4 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Lims1Q99JW4 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Lims1Q99JW4 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Lims1Q99JW4 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Lims1Q99JW4 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Lims1Q99JW4 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Lims1Q99JW4 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Lims1Q99JW4 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Lims1Q99JW4 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
Lims1Q99JW4 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Lims1Q99JW4 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Lims1Q99JW4 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC11.93□□□□□ -0.5
Lims1Q99JW4 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Lims1Q99JW4 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Lims1Q99JW4 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Lims1Q99JW4 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Lims1Q99JW4 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Lims1Q99JW4 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Lims1Q99JW4 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Lims1Q99JW4 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC11.92□□□□□ -0.5
Lims1Q99JW4 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Lims1Q99JW4 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Lims1Q99JW4 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Lims1Q99JW4 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Lims1Q99JW4 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Lims1Q99JW4 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Lims1Q99JW4 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Lims1Q99JW4 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Lims1Q99JW4 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Lims1Q99JW4 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Lims1Q99JW4 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Lims1Q99JW4 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Lims1Q99JW4 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Lims1Q99JW4 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Lims1Q99JW4 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Lims1Q99JW4 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Lims1Q99JW4 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Lims1Q99JW4 Gm11424-201ENSMUST00000121929 829 ntBASIC11.92□□□□□ -0.5
Lims1Q99JW4 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC11.92□□□□□ -0.5
Lims1Q99JW4 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC11.92□□□□□ -0.5
Lims1Q99JW4 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Lims1Q99JW4 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Lims1Q99JW4 Gm28819-201ENSMUST00000186691 572 ntTSL 5 BASIC11.92□□□□□ -0.5
Lims1Q99JW4 Gm28840-208ENSMUST00000191514 738 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Lims1Q99JW4 Gm42550-201ENSMUST00000201553 960 ntBASIC11.92□□□□□ -0.5
Lims1Q99JW4 Gm44985-201ENSMUST00000206202 1016 ntBASIC11.92□□□□□ -0.5
Lims1Q99JW4 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC11.92□□□□□ -0.5
Lims1Q99JW4 AC135669.1-202ENSMUST00000216742 540 ntBASIC11.92□□□□□ -0.5
Lims1Q99JW4 AC155258.1-201ENSMUST00000219303 253 ntBASIC11.92□□□□□ -0.5
Lims1Q99JW4 AC192088.1-201ENSMUST00000227561 301 ntBASIC11.92□□□□□ -0.5
Lims1Q99JW4 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC11.92□□□□□ -0.5
Lims1Q99JW4 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Lims1Q99JW4 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC11.92□□□□□ -0.5
Lims1Q99JW4 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Lims1Q99JW4 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Lims1Q99JW4 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Lims1Q99JW4 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Lims1Q99JW4 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Lims1Q99JW4 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Lims1Q99JW4 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC11.92□□□□□ -0.5
Lims1Q99JW4 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lims1Q99JW4 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lims1Q99JW4 Mbnl2-204ENSMUST00000227012 2390 ntBASIC11.91□□□□□ -0.5
Lims1Q99JW4 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Lims1Q99JW4 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC11.91□□□□□ -0.5
Lims1Q99JW4 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lims1Q99JW4 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lims1Q99JW4 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC11.91□□□□□ -0.5
Lims1Q99JW4 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC11.91□□□□□ -0.5
Lims1Q99JW4 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC11.91□□□□□ -0.5
Lims1Q99JW4 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
Lims1Q99JW4 Gm31326-201ENSMUST00000191856 1048 ntBASIC11.91□□□□□ -0.5
Lims1Q99JW4 Gm44124-201ENSMUST00000204159 472 ntBASIC11.91□□□□□ -0.5
Lims1Q99JW4 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC11.91□□□□□ -0.5
Lims1Q99JW4 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lims1Q99JW4 Wdyhv1-203ENSMUST00000226889 394 ntBASIC11.91□□□□□ -0.5
Lims1Q99JW4 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lims1Q99JW4 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lims1Q99JW4 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lims1Q99JW4 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC11.91□□□□□ -0.5
Lims1Q99JW4 Nupl1-206ENSMUST00000225111 2936 ntBASIC11.91□□□□□ -0.5
Lims1Q99JW4 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lims1Q99JW4 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lims1Q99JW4 AC164702.1-201ENSMUST00000220135 2212 ntBASIC11.91□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms