Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trim60Q8VI40 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trim60Q8VI40 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
Trim60Q8VI40 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Trim60Q8VI40 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Trim60Q8VI40 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim60Q8VI40 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim60Q8VI40 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim60Q8VI40 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim60Q8VI40 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Trim60Q8VI40 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim60Q8VI40 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC13.53□□□□□ -0.24
Trim60Q8VI40 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim60Q8VI40 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Trim60Q8VI40 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Trim60Q8VI40 Gm15371-201ENSMUST00000117057 784 ntBASIC13.53□□□□□ -0.24
Trim60Q8VI40 Gm14057-201ENSMUST00000120631 482 ntBASIC13.53□□□□□ -0.24
Trim60Q8VI40 Gm12416-201ENSMUST00000120911 1008 ntBASIC13.53□□□□□ -0.24
Trim60Q8VI40 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
Trim60Q8VI40 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC13.53□□□□□ -0.24
Trim60Q8VI40 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim60Q8VI40 Gm5354-201ENSMUST00000182417 973 ntBASIC13.53□□□□□ -0.24
Trim60Q8VI40 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trim60Q8VI40 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC13.53□□□□□ -0.24
Trim60Q8VI40 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC13.53□□□□□ -0.24
Trim60Q8VI40 AC192088.1-201ENSMUST00000227561 301 ntBASIC13.53□□□□□ -0.24
Trim60Q8VI40 AC158982.1-201ENSMUST00000228377 901 ntBASIC13.53□□□□□ -0.24
Trim60Q8VI40 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim60Q8VI40 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim60Q8VI40 Gm6263-201ENSMUST00000120029 1342 ntBASIC13.53□□□□□ -0.24
Trim60Q8VI40 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim60Q8VI40 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Trim60Q8VI40 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim60Q8VI40 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC13.53□□□□□ -0.24
Trim60Q8VI40 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim60Q8VI40 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim60Q8VI40 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim60Q8VI40 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim60Q8VI40 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim60Q8VI40 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim60Q8VI40 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim60Q8VI40 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim60Q8VI40 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim60Q8VI40 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim60Q8VI40 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim60Q8VI40 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Trim60Q8VI40 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC13.53□□□□□ -0.24
Trim60Q8VI40 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim60Q8VI40 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim60Q8VI40 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim60Q8VI40 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trim60Q8VI40 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Trim60Q8VI40 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC13.52□□□□□ -0.24
Trim60Q8VI40 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
Trim60Q8VI40 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trim60Q8VI40 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trim60Q8VI40 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC13.52□□□□□ -0.24
Trim60Q8VI40 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC13.52□□□□□ -0.24
Trim60Q8VI40 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trim60Q8VI40 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trim60Q8VI40 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trim60Q8VI40 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trim60Q8VI40 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trim60Q8VI40 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Trim60Q8VI40 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trim60Q8VI40 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trim60Q8VI40 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC13.52□□□□□ -0.25
Trim60Q8VI40 Gm15487-201ENSMUST00000122373 465 ntBASIC13.52□□□□□ -0.25
Trim60Q8VI40 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trim60Q8VI40 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC13.52□□□□□ -0.25
Trim60Q8VI40 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trim60Q8VI40 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trim60Q8VI40 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trim60Q8VI40 AC132863.2-201ENSMUST00000226643 799 ntBASIC13.52□□□□□ -0.25
Trim60Q8VI40 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trim60Q8VI40 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Trim60Q8VI40 Gm9755-201ENSMUST00000032981 1356 ntBASIC13.52□□□□□ -0.25
Trim60Q8VI40 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trim60Q8VI40 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trim60Q8VI40 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trim60Q8VI40 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Trim60Q8VI40 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trim60Q8VI40 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC13.52□□□□□ -0.25
Trim60Q8VI40 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trim60Q8VI40 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trim60Q8VI40 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trim60Q8VI40 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trim60Q8VI40 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trim60Q8VI40 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trim60Q8VI40 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim60Q8VI40 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Trim60Q8VI40 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim60Q8VI40 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim60Q8VI40 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim60Q8VI40 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim60Q8VI40 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim60Q8VI40 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Trim60Q8VI40 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC13.51□□□□□ -0.25
Trim60Q8VI40 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim60Q8VI40 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms