Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Gm19220-201ENSMUST00000222682 803 ntBASIC12.55□□□□□ -0.4
Lsm1Q8VC85 AC138604.1-201ENSMUST00000226969 739 ntBASIC12.55□□□□□ -0.4
Lsm1Q8VC85 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC12.55□□□□□ -0.4
Lsm1Q8VC85 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Lsm1Q8VC85 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Lsm1Q8VC85 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Lsm1Q8VC85 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC12.55□□□□□ -0.4
Lsm1Q8VC85 Gm17435-202ENSMUST00000212699 1998 ntBASIC12.55□□□□□ -0.4
Lsm1Q8VC85 Abhd6-203ENSMUST00000225234 1958 ntBASIC12.55□□□□□ -0.4
Lsm1Q8VC85 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Lsm1Q8VC85 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Lsm1Q8VC85 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Lsm1Q8VC85 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Lsm1Q8VC85 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Lsm1Q8VC85 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Lsm1Q8VC85 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Lsm1Q8VC85 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Lsm1Q8VC85 Gm20633-201ENSMUST00000176742 2831 ntBASIC12.55□□□□□ -0.4
Lsm1Q8VC85 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Lsm1Q8VC85 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Lsm1Q8VC85 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Lsm1Q8VC85 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Lsm1Q8VC85 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Lsm1Q8VC85 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Lsm1Q8VC85 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Lsm1Q8VC85 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Lsm1Q8VC85 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Lsm1Q8VC85 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Lsm1Q8VC85 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Lsm1Q8VC85 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Lsm1Q8VC85 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Lsm1Q8VC85 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Lsm1Q8VC85 Gm43045-201ENSMUST00000198725 2095 ntBASIC12.54□□□□□ -0.4
Lsm1Q8VC85 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Lsm1Q8VC85 Gm10728-201ENSMUST00000194292 1829 ntBASIC12.54□□□□□ -0.4
Lsm1Q8VC85 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Lsm1Q8VC85 Gm15371-201ENSMUST00000117057 784 ntBASIC12.54□□□□□ -0.4
Lsm1Q8VC85 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Lsm1Q8VC85 Gm11978-201ENSMUST00000122315 466 ntBASIC12.54□□□□□ -0.4
Lsm1Q8VC85 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Lsm1Q8VC85 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC12.54□□□□□ -0.4
Lsm1Q8VC85 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Lsm1Q8VC85 Gm7558-201ENSMUST00000193221 1165 ntBASIC12.54□□□□□ -0.4
Lsm1Q8VC85 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Lsm1Q8VC85 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC12.54□□□□□ -0.4
Lsm1Q8VC85 Gm6218-201ENSMUST00000219812 628 ntBASIC12.54□□□□□ -0.4
Lsm1Q8VC85 AC156560.2-201ENSMUST00000221232 264 ntBASIC12.54□□□□□ -0.4
Lsm1Q8VC85 Zkscan3-207ENSMUST00000223831 2101 ntBASIC12.54□□□□□ -0.4
Lsm1Q8VC85 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Lsm1Q8VC85 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Lsm1Q8VC85 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Lsm1Q8VC85 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Lsm1Q8VC85 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Lsm1Q8VC85 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Lsm1Q8VC85 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC12.54□□□□□ -0.4
Lsm1Q8VC85 Gm18630-201ENSMUST00000222109 1397 ntBASIC12.54□□□□□ -0.4
Lsm1Q8VC85 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Lsm1Q8VC85 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Lsm1Q8VC85 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC12.54□□□□□ -0.4
Lsm1Q8VC85 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Lsm1Q8VC85 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lsm1Q8VC85 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC12.53□□□□□ -0.4
Lsm1Q8VC85 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lsm1Q8VC85 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lsm1Q8VC85 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lsm1Q8VC85 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Lsm1Q8VC85 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lsm1Q8VC85 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lsm1Q8VC85 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lsm1Q8VC85 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lsm1Q8VC85 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lsm1Q8VC85 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Lsm1Q8VC85 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lsm1Q8VC85 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lsm1Q8VC85 Gm5303-201ENSMUST00000117943 1252 ntBASIC12.53□□□□□ -0.4
Lsm1Q8VC85 Gm12341-201ENSMUST00000119724 503 ntBASIC12.53□□□□□ -0.4
Lsm1Q8VC85 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Lsm1Q8VC85 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC12.53□□□□□ -0.4
Lsm1Q8VC85 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC12.53□□□□□ -0.4
Lsm1Q8VC85 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lsm1Q8VC85 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC12.53□□□□□ -0.4
Lsm1Q8VC85 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC12.53□□□□□ -0.4
Lsm1Q8VC85 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lsm1Q8VC85 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lsm1Q8VC85 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lsm1Q8VC85 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lsm1Q8VC85 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lsm1Q8VC85 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lsm1Q8VC85 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lsm1Q8VC85 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lsm1Q8VC85 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Lsm1Q8VC85 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC12.53□□□□□ -0.4
Lsm1Q8VC85 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lsm1Q8VC85 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lsm1Q8VC85 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lsm1Q8VC85 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC12.53□□□□□ -0.4
Lsm1Q8VC85 Gm43463-201ENSMUST00000195967 1803 ntBASIC12.53□□□□□ -0.4
Lsm1Q8VC85 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Lsm1Q8VC85 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lsm1Q8VC85 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC12.53□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms