Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Cchcr1Q8K2I2 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Cchcr1Q8K2I2 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Cchcr1Q8K2I2 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Cchcr1Q8K2I2 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Cchcr1Q8K2I2 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Cchcr1Q8K2I2 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Cchcr1Q8K2I2 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Cchcr1Q8K2I2 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Cchcr1Q8K2I2 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Cchcr1Q8K2I2 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Cchcr1Q8K2I2 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC15.46■□□□□ 0.07
Cchcr1Q8K2I2 Gm11978-201ENSMUST00000122315 466 ntBASIC15.46■□□□□ 0.07
Cchcr1Q8K2I2 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Cchcr1Q8K2I2 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC15.46■□□□□ 0.07
Cchcr1Q8K2I2 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Cchcr1Q8K2I2 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Cchcr1Q8K2I2 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Cchcr1Q8K2I2 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Cchcr1Q8K2I2 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Cchcr1Q8K2I2 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Cchcr1Q8K2I2 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Cchcr1Q8K2I2 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
Cchcr1Q8K2I2 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Cchcr1Q8K2I2 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Cchcr1Q8K2I2 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Cchcr1Q8K2I2 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Cchcr1Q8K2I2 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.07
Cchcr1Q8K2I2 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.06
Cchcr1Q8K2I2 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.06
Cchcr1Q8K2I2 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.06
Cchcr1Q8K2I2 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC15.45■□□□□ 0.06
Cchcr1Q8K2I2 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Cchcr1Q8K2I2 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Cchcr1Q8K2I2 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
Cchcr1Q8K2I2 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC15.45■□□□□ 0.06
Cchcr1Q8K2I2 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Cchcr1Q8K2I2 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Cchcr1Q8K2I2 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Cchcr1Q8K2I2 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Cchcr1Q8K2I2 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC15.45■□□□□ 0.06
Cchcr1Q8K2I2 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Cchcr1Q8K2I2 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Cchcr1Q8K2I2 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Cchcr1Q8K2I2 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Cchcr1Q8K2I2 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Cchcr1Q8K2I2 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC15.45■□□□□ 0.06
Cchcr1Q8K2I2 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Cchcr1Q8K2I2 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC15.45■□□□□ 0.06
Cchcr1Q8K2I2 AC122305.4-201ENSMUST00000216159 1206 ntBASIC15.45■□□□□ 0.06
Cchcr1Q8K2I2 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Cchcr1Q8K2I2 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Cchcr1Q8K2I2 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Cchcr1Q8K2I2 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC15.45■□□□□ 0.06
Cchcr1Q8K2I2 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Cchcr1Q8K2I2 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Cchcr1Q8K2I2 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Cchcr1Q8K2I2 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC15.45■□□□□ 0.06
Cchcr1Q8K2I2 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Cchcr1Q8K2I2 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Cchcr1Q8K2I2 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Cchcr1Q8K2I2 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC15.45■□□□□ 0.06
Cchcr1Q8K2I2 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Cchcr1Q8K2I2 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Cchcr1Q8K2I2 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Cchcr1Q8K2I2 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Cchcr1Q8K2I2 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Cchcr1Q8K2I2 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC15.45■□□□□ 0.06
Cchcr1Q8K2I2 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Cchcr1Q8K2I2 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Cchcr1Q8K2I2 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Cchcr1Q8K2I2 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Cchcr1Q8K2I2 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Cchcr1Q8K2I2 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Cchcr1Q8K2I2 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Cchcr1Q8K2I2 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Cchcr1Q8K2I2 Gm15222-202ENSMUST00000228667 1726 ntBASIC15.44■□□□□ 0.06
Cchcr1Q8K2I2 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Cchcr1Q8K2I2 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC15.44■□□□□ 0.06
Cchcr1Q8K2I2 Gm15429-201ENSMUST00000151268 798 ntBASIC15.44■□□□□ 0.06
Cchcr1Q8K2I2 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC15.44■□□□□ 0.06
Cchcr1Q8K2I2 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC15.44■□□□□ 0.06
Cchcr1Q8K2I2 Gm37917-201ENSMUST00000194711 392 ntBASIC15.44■□□□□ 0.06
Cchcr1Q8K2I2 AC125206.2-201ENSMUST00000217454 574 ntBASIC15.44■□□□□ 0.06
Cchcr1Q8K2I2 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Cchcr1Q8K2I2 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
Cchcr1Q8K2I2 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Cchcr1Q8K2I2 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC15.44■□□□□ 0.06
Cchcr1Q8K2I2 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Cchcr1Q8K2I2 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Cchcr1Q8K2I2 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Cchcr1Q8K2I2 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Cchcr1Q8K2I2 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Cchcr1Q8K2I2 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC15.44■□□□□ 0.06
Cchcr1Q8K2I2 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Cchcr1Q8K2I2 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Cchcr1Q8K2I2 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Cchcr1Q8K2I2 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Cchcr1Q8K2I2 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Cchcr1Q8K2I2 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms