Protein–RNA interactions for Protein: Q8C2A2

Tsen54, tRNA-splicing endonuclease subunit Sen54, mousemouse

Predictions only

Length 525 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tsen54Q8C2A2 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC10.97□□□□□ -0.65
Tsen54Q8C2A2 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Tsen54Q8C2A2 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Tsen54Q8C2A2 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Tsen54Q8C2A2 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Tsen54Q8C2A2 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC10.97□□□□□ -0.65
Tsen54Q8C2A2 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Tsen54Q8C2A2 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC10.97□□□□□ -0.65
Tsen54Q8C2A2 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Tsen54Q8C2A2 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Tsen54Q8C2A2 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC10.97□□□□□ -0.65
Tsen54Q8C2A2 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Tsen54Q8C2A2 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC10.97□□□□□ -0.65
Tsen54Q8C2A2 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Tsen54Q8C2A2 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Tsen54Q8C2A2 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Tsen54Q8C2A2 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Tsen54Q8C2A2 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Tsen54Q8C2A2 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Tsen54Q8C2A2 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Tsen54Q8C2A2 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Tsen54Q8C2A2 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Tsen54Q8C2A2 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC10.96□□□□□ -0.65
Tsen54Q8C2A2 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Tsen54Q8C2A2 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Tsen54Q8C2A2 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Tsen54Q8C2A2 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
Tsen54Q8C2A2 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC10.96□□□□□ -0.65
Tsen54Q8C2A2 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Tsen54Q8C2A2 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC10.96□□□□□ -0.65
Tsen54Q8C2A2 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
Tsen54Q8C2A2 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC10.96□□□□□ -0.65
Tsen54Q8C2A2 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
Tsen54Q8C2A2 Gm25927-201ENSMUST00000175058 117 ntBASIC10.96□□□□□ -0.65
Tsen54Q8C2A2 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Tsen54Q8C2A2 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Tsen54Q8C2A2 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
Tsen54Q8C2A2 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Tsen54Q8C2A2 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC10.96□□□□□ -0.66
Tsen54Q8C2A2 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Tsen54Q8C2A2 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Tsen54Q8C2A2 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC10.96□□□□□ -0.66
Tsen54Q8C2A2 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Tsen54Q8C2A2 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.66
Tsen54Q8C2A2 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.66
Tsen54Q8C2A2 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Tsen54Q8C2A2 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC10.96□□□□□ -0.66
Tsen54Q8C2A2 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Tsen54Q8C2A2 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Tsen54Q8C2A2 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Tsen54Q8C2A2 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Tsen54Q8C2A2 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.66
Tsen54Q8C2A2 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.66
Tsen54Q8C2A2 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Tsen54Q8C2A2 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Tsen54Q8C2A2 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC10.95□□□□□ -0.66
Tsen54Q8C2A2 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Tsen54Q8C2A2 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Tsen54Q8C2A2 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Tsen54Q8C2A2 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Tsen54Q8C2A2 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC10.95□□□□□ -0.66
Tsen54Q8C2A2 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Tsen54Q8C2A2 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Tsen54Q8C2A2 Gm37014-201ENSMUST00000194723 2253 ntBASIC10.95□□□□□ -0.66
Tsen54Q8C2A2 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Tsen54Q8C2A2 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Tsen54Q8C2A2 AC159621.2-201ENSMUST00000223519 1326 ntBASIC10.95□□□□□ -0.66
Tsen54Q8C2A2 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Tsen54Q8C2A2 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Tsen54Q8C2A2 Gm24543-201ENSMUST00000103867 82 ntBASIC10.95□□□□□ -0.66
Tsen54Q8C2A2 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC10.95□□□□□ -0.66
Tsen54Q8C2A2 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC10.95□□□□□ -0.66
Tsen54Q8C2A2 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC10.95□□□□□ -0.66
Tsen54Q8C2A2 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Tsen54Q8C2A2 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Tsen54Q8C2A2 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Tsen54Q8C2A2 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Tsen54Q8C2A2 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC10.95□□□□□ -0.66
Tsen54Q8C2A2 AC159114.1-201ENSMUST00000220349 266 ntBASIC10.95□□□□□ -0.66
Tsen54Q8C2A2 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Tsen54Q8C2A2 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Tsen54Q8C2A2 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Tsen54Q8C2A2 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Tsen54Q8C2A2 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Tsen54Q8C2A2 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Tsen54Q8C2A2 Gm43051-201ENSMUST00000201096 2678 ntBASIC10.95□□□□□ -0.66
Tsen54Q8C2A2 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Tsen54Q8C2A2 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC10.95□□□□□ -0.66
Tsen54Q8C2A2 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Tsen54Q8C2A2 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Tsen54Q8C2A2 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Tsen54Q8C2A2 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Tsen54Q8C2A2 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Tsen54Q8C2A2 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Tsen54Q8C2A2 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Tsen54Q8C2A2 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Tsen54Q8C2A2 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Tsen54Q8C2A2 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Tsen54Q8C2A2 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Tsen54Q8C2A2 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 53.5 ms