Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC14.49□□□□□ -0.09
Trim47Q8C0E3 Mir1938-201ENSMUST00000158746 100 ntBASIC14.49□□□□□ -0.09
Trim47Q8C0E3 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim47Q8C0E3 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trim47Q8C0E3 Gm17208-201ENSMUST00000168388 535 ntBASIC14.49□□□□□ -0.09
Trim47Q8C0E3 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Trim47Q8C0E3 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC14.49□□□□□ -0.09
Trim47Q8C0E3 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trim47Q8C0E3 Gm37008-201ENSMUST00000195712 319 ntBASIC14.49□□□□□ -0.09
Trim47Q8C0E3 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trim47Q8C0E3 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trim47Q8C0E3 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim47Q8C0E3 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC14.49□□□□□ -0.09
Trim47Q8C0E3 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim47Q8C0E3 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trim47Q8C0E3 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim47Q8C0E3 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim47Q8C0E3 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim47Q8C0E3 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim47Q8C0E3 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trim47Q8C0E3 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Trim47Q8C0E3 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim47Q8C0E3 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim47Q8C0E3 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim47Q8C0E3 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim47Q8C0E3 Ksr1-207ENSMUST00000226282 5260 ntBASIC14.49□□□□□ -0.09
Trim47Q8C0E3 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim47Q8C0E3 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC14.49□□□□□ -0.09
Trim47Q8C0E3 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Trim47Q8C0E3 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim47Q8C0E3 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim47Q8C0E3 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim47Q8C0E3 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim47Q8C0E3 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Trim47Q8C0E3 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC14.48□□□□□ -0.09
Trim47Q8C0E3 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim47Q8C0E3 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Trim47Q8C0E3 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim47Q8C0E3 Gm43579-201ENSMUST00000202387 1307 ntBASIC14.48□□□□□ -0.09
Trim47Q8C0E3 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim47Q8C0E3 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim47Q8C0E3 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Trim47Q8C0E3 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
Trim47Q8C0E3 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC14.48□□□□□ -0.09
Trim47Q8C0E3 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim47Q8C0E3 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC14.48□□□□□ -0.09
Trim47Q8C0E3 Gm27572-201ENSMUST00000183702 255 ntBASIC14.48□□□□□ -0.09
Trim47Q8C0E3 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Trim47Q8C0E3 Gm37042-201ENSMUST00000193816 581 ntBASIC14.48□□□□□ -0.09
Trim47Q8C0E3 Gm19184-201ENSMUST00000196798 928 ntBASIC14.48□□□□□ -0.09
Trim47Q8C0E3 Gm4768-201ENSMUST00000206199 686 ntBASIC14.48□□□□□ -0.09
Trim47Q8C0E3 Gm45880-201ENSMUST00000213041 853 ntBASIC14.48□□□□□ -0.09
Trim47Q8C0E3 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC14.48□□□□□ -0.09
Trim47Q8C0E3 AC022775.2-201ENSMUST00000227885 646 ntBASIC14.48□□□□□ -0.09
Trim47Q8C0E3 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim47Q8C0E3 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim47Q8C0E3 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim47Q8C0E3 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Trim47Q8C0E3 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Trim47Q8C0E3 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC14.48□□□□□ -0.09
Trim47Q8C0E3 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Trim47Q8C0E3 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Trim47Q8C0E3 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim47Q8C0E3 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim47Q8C0E3 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim47Q8C0E3 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim47Q8C0E3 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trim47Q8C0E3 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim47Q8C0E3 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC14.47□□□□□ -0.09
Trim47Q8C0E3 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim47Q8C0E3 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim47Q8C0E3 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim47Q8C0E3 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Trim47Q8C0E3 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim47Q8C0E3 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC14.47□□□□□ -0.09
Trim47Q8C0E3 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim47Q8C0E3 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim47Q8C0E3 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trim47Q8C0E3 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim47Q8C0E3 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trim47Q8C0E3 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim47Q8C0E3 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim47Q8C0E3 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trim47Q8C0E3 Gm38157-201ENSMUST00000194178 1698 ntBASIC14.47□□□□□ -0.09
Trim47Q8C0E3 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Trim47Q8C0E3 Gm11591-201ENSMUST00000120063 702 ntBASIC14.47□□□□□ -0.09
Trim47Q8C0E3 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trim47Q8C0E3 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC14.47□□□□□ -0.09
Trim47Q8C0E3 Mir6420-201ENSMUST00000185032 102 ntBASIC14.47□□□□□ -0.09
Trim47Q8C0E3 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC14.47□□□□□ -0.09
Trim47Q8C0E3 Gm18054-201ENSMUST00000207539 555 ntBASIC14.47□□□□□ -0.09
Trim47Q8C0E3 Gm6007-201ENSMUST00000208170 823 ntBASIC14.47□□□□□ -0.09
Trim47Q8C0E3 CU024892.2-201ENSMUST00000224608 832 ntBASIC14.47□□□□□ -0.09
Trim47Q8C0E3 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim47Q8C0E3 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim47Q8C0E3 Gm9823-201ENSMUST00000051212 327 ntBASIC14.47□□□□□ -0.09
Trim47Q8C0E3 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim47Q8C0E3 n-R5s77-201ENSMUST00000083757 119 ntBASIC14.47□□□□□ -0.09
Trim47Q8C0E3 Gm38346-201ENSMUST00000192379 2639 ntBASIC14.47□□□□□ -0.09
Trim47Q8C0E3 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms