Protein–RNA interactions for Protein: Q8BIZ0

Pcdh20, Protocadherin-20, mousemouse

Predictions only

Length 952 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh20Q8BIZ0 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdh20Q8BIZ0 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
Pcdh20Q8BIZ0 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC12.78□□□□□ -0.36
Pcdh20Q8BIZ0 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdh20Q8BIZ0 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC12.78□□□□□ -0.36
Pcdh20Q8BIZ0 Gm45384-201ENSMUST00000210451 277 ntBASIC12.78□□□□□ -0.36
Pcdh20Q8BIZ0 AC156560.2-201ENSMUST00000221232 264 ntBASIC12.78□□□□□ -0.36
Pcdh20Q8BIZ0 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdh20Q8BIZ0 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdh20Q8BIZ0 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC12.78□□□□□ -0.36
Pcdh20Q8BIZ0 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdh20Q8BIZ0 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC12.78□□□□□ -0.36
Pcdh20Q8BIZ0 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC12.78□□□□□ -0.36
Pcdh20Q8BIZ0 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdh20Q8BIZ0 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdh20Q8BIZ0 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdh20Q8BIZ0 Gm45743-201ENSMUST00000212701 2795 ntBASIC12.78□□□□□ -0.36
Pcdh20Q8BIZ0 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdh20Q8BIZ0 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdh20Q8BIZ0 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC12.78□□□□□ -0.36
Pcdh20Q8BIZ0 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdh20Q8BIZ0 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdh20Q8BIZ0 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdh20Q8BIZ0 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdh20Q8BIZ0 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC12.78□□□□□ -0.36
Pcdh20Q8BIZ0 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdh20Q8BIZ0 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Pcdh20Q8BIZ0 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Pcdh20Q8BIZ0 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC12.77□□□□□ -0.36
Pcdh20Q8BIZ0 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Pcdh20Q8BIZ0 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Pcdh20Q8BIZ0 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
Pcdh20Q8BIZ0 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Pcdh20Q8BIZ0 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Pcdh20Q8BIZ0 AC125108.1-201ENSMUST00000218986 2330 ntBASIC12.77□□□□□ -0.36
Pcdh20Q8BIZ0 Gm20554-201ENSMUST00000177421 2352 ntBASIC12.77□□□□□ -0.36
Pcdh20Q8BIZ0 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Pcdh20Q8BIZ0 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Pcdh20Q8BIZ0 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdh20Q8BIZ0 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Pcdh20Q8BIZ0 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC12.77□□□□□ -0.37
Pcdh20Q8BIZ0 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC12.77□□□□□ -0.37
Pcdh20Q8BIZ0 Gm43094-201ENSMUST00000196549 921 ntBASIC12.77□□□□□ -0.37
Pcdh20Q8BIZ0 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdh20Q8BIZ0 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC12.77□□□□□ -0.37
Pcdh20Q8BIZ0 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdh20Q8BIZ0 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC12.77□□□□□ -0.37
Pcdh20Q8BIZ0 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdh20Q8BIZ0 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdh20Q8BIZ0 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Pcdh20Q8BIZ0 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdh20Q8BIZ0 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Pcdh20Q8BIZ0 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdh20Q8BIZ0 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdh20Q8BIZ0 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Pcdh20Q8BIZ0 Tmed9-203ENSMUST00000224741 1450 ntBASIC12.77□□□□□ -0.37
Pcdh20Q8BIZ0 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdh20Q8BIZ0 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC12.77□□□□□ -0.37
Pcdh20Q8BIZ0 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdh20Q8BIZ0 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdh20Q8BIZ0 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdh20Q8BIZ0 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdh20Q8BIZ0 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdh20Q8BIZ0 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdh20Q8BIZ0 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdh20Q8BIZ0 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Pcdh20Q8BIZ0 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdh20Q8BIZ0 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Pcdh20Q8BIZ0 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdh20Q8BIZ0 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdh20Q8BIZ0 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdh20Q8BIZ0 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdh20Q8BIZ0 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdh20Q8BIZ0 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdh20Q8BIZ0 Gm12485-201ENSMUST00000119641 291 ntBASIC12.76□□□□□ -0.37
Pcdh20Q8BIZ0 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdh20Q8BIZ0 Gm26464-201ENSMUST00000157094 305 ntBASIC12.76□□□□□ -0.37
Pcdh20Q8BIZ0 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdh20Q8BIZ0 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC12.76□□□□□ -0.37
Pcdh20Q8BIZ0 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC12.76□□□□□ -0.37
Pcdh20Q8BIZ0 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC12.76□□□□□ -0.37
Pcdh20Q8BIZ0 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Pcdh20Q8BIZ0 AC155252.1-201ENSMUST00000226462 1208 ntBASIC12.76□□□□□ -0.37
Pcdh20Q8BIZ0 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdh20Q8BIZ0 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdh20Q8BIZ0 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdh20Q8BIZ0 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC12.76□□□□□ -0.37
Pcdh20Q8BIZ0 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdh20Q8BIZ0 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC12.76□□□□□ -0.37
Pcdh20Q8BIZ0 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdh20Q8BIZ0 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Pcdh20Q8BIZ0 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdh20Q8BIZ0 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Pcdh20Q8BIZ0 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Pcdh20Q8BIZ0 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC12.76□□□□□ -0.37
Pcdh20Q8BIZ0 Gm5989-201ENSMUST00000096092 2077 ntBASIC12.76□□□□□ -0.37
Pcdh20Q8BIZ0 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC12.76□□□□□ -0.37
Pcdh20Q8BIZ0 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Pcdh20Q8BIZ0 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdh20Q8BIZ0 Gm42480-201ENSMUST00000198434 2595 ntBASIC12.76□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 54.8 ms