Protein–RNA interactions for Protein: Q8BHH8

Clrn3, Clarin-3, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn3Q8BHH8 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Clrn3Q8BHH8 Gm4782-201ENSMUST00000168705 2046 ntBASIC12.33□□□□□ -0.44
Clrn3Q8BHH8 Gm40377-201ENSMUST00000204604 2015 ntBASIC12.33□□□□□ -0.44
Clrn3Q8BHH8 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Clrn3Q8BHH8 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Clrn3Q8BHH8 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Clrn3Q8BHH8 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Clrn3Q8BHH8 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Clrn3Q8BHH8 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Clrn3Q8BHH8 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC12.33□□□□□ -0.44
Clrn3Q8BHH8 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC12.33□□□□□ -0.44
Clrn3Q8BHH8 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Clrn3Q8BHH8 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Clrn3Q8BHH8 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Clrn3Q8BHH8 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Clrn3Q8BHH8 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Clrn3Q8BHH8 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Clrn3Q8BHH8 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Clrn3Q8BHH8 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Clrn3Q8BHH8 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Clrn3Q8BHH8 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Clrn3Q8BHH8 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Clrn3Q8BHH8 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Clrn3Q8BHH8 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Clrn3Q8BHH8 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Clrn3Q8BHH8 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Clrn3Q8BHH8 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Clrn3Q8BHH8 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC12.32□□□□□ -0.44
Clrn3Q8BHH8 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
Clrn3Q8BHH8 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Clrn3Q8BHH8 Gm15678-201ENSMUST00000117573 960 ntBASIC12.32□□□□□ -0.44
Clrn3Q8BHH8 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC12.32□□□□□ -0.44
Clrn3Q8BHH8 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC12.32□□□□□ -0.44
Clrn3Q8BHH8 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC12.32□□□□□ -0.44
Clrn3Q8BHH8 AC173210.1-201ENSMUST00000222341 1131 ntBASIC12.32□□□□□ -0.44
Clrn3Q8BHH8 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Clrn3Q8BHH8 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Clrn3Q8BHH8 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Clrn3Q8BHH8 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Clrn3Q8BHH8 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Clrn3Q8BHH8 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Clrn3Q8BHH8 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Clrn3Q8BHH8 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Clrn3Q8BHH8 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Clrn3Q8BHH8 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Clrn3Q8BHH8 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Clrn3Q8BHH8 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Clrn3Q8BHH8 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Clrn3Q8BHH8 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Clrn3Q8BHH8 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Clrn3Q8BHH8 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Clrn3Q8BHH8 AC154725.1-201ENSMUST00000224826 1961 ntBASIC12.32□□□□□ -0.44
Clrn3Q8BHH8 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Clrn3Q8BHH8 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Clrn3Q8BHH8 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Clrn3Q8BHH8 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC12.32□□□□□ -0.44
Clrn3Q8BHH8 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Clrn3Q8BHH8 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Clrn3Q8BHH8 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Clrn3Q8BHH8 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Clrn3Q8BHH8 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Clrn3Q8BHH8 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Clrn3Q8BHH8 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Clrn3Q8BHH8 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Clrn3Q8BHH8 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Clrn3Q8BHH8 AC154747.3-201ENSMUST00000224471 3470 ntBASIC12.31□□□□□ -0.44
Clrn3Q8BHH8 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC12.31□□□□□ -0.44
Clrn3Q8BHH8 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Clrn3Q8BHH8 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Clrn3Q8BHH8 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Clrn3Q8BHH8 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Clrn3Q8BHH8 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC12.31□□□□□ -0.44
Clrn3Q8BHH8 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC12.31□□□□□ -0.44
Clrn3Q8BHH8 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Clrn3Q8BHH8 Gm27701-201ENSMUST00000184498 110 ntBASIC12.31□□□□□ -0.44
Clrn3Q8BHH8 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Clrn3Q8BHH8 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Clrn3Q8BHH8 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Clrn3Q8BHH8 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Clrn3Q8BHH8 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Clrn3Q8BHH8 Rn7sk-201ENSMUST00000083103 331 ntBASIC12.31□□□□□ -0.44
Clrn3Q8BHH8 Gm26315-201ENSMUST00000083890 321 ntBASIC12.31□□□□□ -0.44
Clrn3Q8BHH8 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Clrn3Q8BHH8 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Clrn3Q8BHH8 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Clrn3Q8BHH8 CT025678.1-201ENSMUST00000214795 2972 ntBASIC12.31□□□□□ -0.44
Clrn3Q8BHH8 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Clrn3Q8BHH8 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Clrn3Q8BHH8 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Clrn3Q8BHH8 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Clrn3Q8BHH8 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
Clrn3Q8BHH8 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Clrn3Q8BHH8 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Clrn3Q8BHH8 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Clrn3Q8BHH8 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Clrn3Q8BHH8 Gm9755-201ENSMUST00000032981 1356 ntBASIC12.3□□□□□ -0.44
Clrn3Q8BHH8 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Clrn3Q8BHH8 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Clrn3Q8BHH8 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Clrn3Q8BHH8 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 62.3 ms