Protein–RNA interactions for Protein: Q80TR4

Slit1, Slit homolog 1 protein, mousemouse

Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slit1Q80TR4 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Slit1Q80TR4 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Slit1Q80TR4 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Slit1Q80TR4 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Slit1Q80TR4 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Slit1Q80TR4 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC16.43■□□□□ 0.22
Slit1Q80TR4 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Slit1Q80TR4 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Slit1Q80TR4 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Slit1Q80TR4 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Slit1Q80TR4 CT025610.1-201ENSMUST00000224552 1786 ntBASIC16.43■□□□□ 0.22
Slit1Q80TR4 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Slit1Q80TR4 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Slit1Q80TR4 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Slit1Q80TR4 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Slit1Q80TR4 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Slit1Q80TR4 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC16.43■□□□□ 0.22
Slit1Q80TR4 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC16.43■□□□□ 0.22
Slit1Q80TR4 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
Slit1Q80TR4 Gm17168-201ENSMUST00000169146 345 ntTSL 5 BASIC16.43■□□□□ 0.22
Slit1Q80TR4 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Slit1Q80TR4 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC16.43■□□□□ 0.22
Slit1Q80TR4 3300002P13Rik-201ENSMUST00000204020 1092 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Slit1Q80TR4 AC141438.2-201ENSMUST00000215068 271 ntBASIC16.43■□□□□ 0.22
Slit1Q80TR4 AC135114.1-201ENSMUST00000228682 270 ntBASIC16.43■□□□□ 0.22
Slit1Q80TR4 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Slit1Q80TR4 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Slit1Q80TR4 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Slit1Q80TR4 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Slit1Q80TR4 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Slit1Q80TR4 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Slit1Q80TR4 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Slit1Q80TR4 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Slit1Q80TR4 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC16.43■□□□□ 0.22
Slit1Q80TR4 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Slit1Q80TR4 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Slit1Q80TR4 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Slit1Q80TR4 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Slit1Q80TR4 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Slit1Q80TR4 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Slit1Q80TR4 Gm11941-201ENSMUST00000119904 610 ntBASIC16.42■□□□□ 0.22
Slit1Q80TR4 Gm42817-201ENSMUST00000198962 607 ntTSL 3 BASIC16.42■□□□□ 0.22
Slit1Q80TR4 Timm9-201ENSMUST00000021486 794 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Slit1Q80TR4 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Slit1Q80TR4 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Slit1Q80TR4 Gm13812-201ENSMUST00000118061 1347 ntBASIC16.42■□□□□ 0.22
Slit1Q80TR4 Gm13810-201ENSMUST00000118584 1347 ntBASIC16.42■□□□□ 0.22
Slit1Q80TR4 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
Slit1Q80TR4 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Slit1Q80TR4 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Slit1Q80TR4 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Slit1Q80TR4 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Slit1Q80TR4 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Slit1Q80TR4 Gm5421-201ENSMUST00000181698 2354 ntBASIC16.42■□□□□ 0.22
Slit1Q80TR4 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Slit1Q80TR4 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Slit1Q80TR4 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Slit1Q80TR4 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Slit1Q80TR4 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Slit1Q80TR4 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC16.41■□□□□ 0.22
Slit1Q80TR4 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Slit1Q80TR4 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Slit1Q80TR4 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Slit1Q80TR4 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Slit1Q80TR4 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Slit1Q80TR4 Gm13035-201ENSMUST00000117496 342 ntBASIC16.41■□□□□ 0.22
Slit1Q80TR4 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC16.41■□□□□ 0.22
Slit1Q80TR4 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC16.41■□□□□ 0.22
Slit1Q80TR4 Gm10051-201ENSMUST00000145209 414 ntBASIC16.41■□□□□ 0.22
Slit1Q80TR4 Gm43962-201ENSMUST00000203898 190 ntBASIC16.41■□□□□ 0.22
Slit1Q80TR4 AC159819.2-201ENSMUST00000216151 342 ntBASIC16.41■□□□□ 0.22
Slit1Q80TR4 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Slit1Q80TR4 Mlf1-201ENSMUST00000061322 1113 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
Slit1Q80TR4 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Slit1Q80TR4 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Slit1Q80TR4 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Slit1Q80TR4 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Slit1Q80TR4 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Slit1Q80TR4 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Slit1Q80TR4 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Slit1Q80TR4 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Slit1Q80TR4 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Slit1Q80TR4 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC16.41■□□□□ 0.22
Slit1Q80TR4 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Slit1Q80TR4 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Slit1Q80TR4 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC16.41■□□□□ 0.22
Slit1Q80TR4 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Slit1Q80TR4 Gm18626-201ENSMUST00000221512 1409 ntBASIC16.4■□□□□ 0.22
Slit1Q80TR4 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Slit1Q80TR4 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Slit1Q80TR4 Gm13394-201ENSMUST00000121658 1000 ntBASIC16.4■□□□□ 0.22
Slit1Q80TR4 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Slit1Q80TR4 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Slit1Q80TR4 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Slit1Q80TR4 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC16.4■□□□□ 0.22
Slit1Q80TR4 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Slit1Q80TR4 AC154252.2-201ENSMUST00000223593 767 ntBASIC16.4■□□□□ 0.22
Slit1Q80TR4 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC16.4■□□□□ 0.22
Slit1Q80TR4 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Slit1Q80TR4 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms