Protein–RNA interactions for Protein: Q64727

Vcl, Vinculin, mousemouse

Known RBP Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VclQ64727 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC12.87□□□□□ -0.35
VclQ64727 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC12.87□□□□□ -0.35
VclQ64727 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
VclQ64727 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
VclQ64727 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
VclQ64727 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
VclQ64727 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC12.87□□□□□ -0.35
VclQ64727 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
VclQ64727 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
VclQ64727 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
VclQ64727 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
VclQ64727 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
VclQ64727 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC12.87□□□□□ -0.35
VclQ64727 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
VclQ64727 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC12.87□□□□□ -0.35
VclQ64727 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
VclQ64727 Gm27331-201ENSMUST00000183705 60 ntBASIC12.87□□□□□ -0.35
VclQ64727 Gm29127-201ENSMUST00000188304 517 ntBASIC12.87□□□□□ -0.35
VclQ64727 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC12.87□□□□□ -0.35
VclQ64727 AC155237.1-201ENSMUST00000226196 1279 ntBASIC12.87□□□□□ -0.35
VclQ64727 AC154276.1-201ENSMUST00000228874 1299 ntBASIC12.87□□□□□ -0.35
VclQ64727 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
VclQ64727 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
VclQ64727 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
VclQ64727 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
VclQ64727 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
VclQ64727 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
VclQ64727 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
VclQ64727 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC12.87□□□□□ -0.35
VclQ64727 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
VclQ64727 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
VclQ64727 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
VclQ64727 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
VclQ64727 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
VclQ64727 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
VclQ64727 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
VclQ64727 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
VclQ64727 Gm37844-201ENSMUST00000192473 4097 ntBASIC12.86□□□□□ -0.35
VclQ64727 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
VclQ64727 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
VclQ64727 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
VclQ64727 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
VclQ64727 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
VclQ64727 Gm28386-201ENSMUST00000189147 1849 ntBASIC12.86□□□□□ -0.35
VclQ64727 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
VclQ64727 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
VclQ64727 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
VclQ64727 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC12.86□□□□□ -0.35
VclQ64727 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
VclQ64727 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC12.86□□□□□ -0.35
VclQ64727 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
VclQ64727 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
VclQ64727 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC12.86□□□□□ -0.35
VclQ64727 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
VclQ64727 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
VclQ64727 Gm45784-201ENSMUST00000188360 142 ntBASIC12.86□□□□□ -0.35
VclQ64727 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC12.86□□□□□ -0.35
VclQ64727 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC12.86□□□□□ -0.35
VclQ64727 AC122305.4-201ENSMUST00000216159 1206 ntBASIC12.86□□□□□ -0.35
VclQ64727 AC134254.1-201ENSMUST00000221362 167 ntBASIC12.86□□□□□ -0.35
VclQ64727 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
VclQ64727 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
VclQ64727 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
VclQ64727 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
VclQ64727 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
VclQ64727 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
VclQ64727 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
VclQ64727 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC12.86□□□□□ -0.35
VclQ64727 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
VclQ64727 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
VclQ64727 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
VclQ64727 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC12.86□□□□□ -0.35
VclQ64727 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
VclQ64727 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
VclQ64727 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
VclQ64727 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
VclQ64727 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
VclQ64727 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
VclQ64727 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
VclQ64727 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
VclQ64727 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
VclQ64727 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
VclQ64727 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
VclQ64727 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
VclQ64727 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
VclQ64727 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
VclQ64727 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
VclQ64727 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
VclQ64727 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
VclQ64727 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
VclQ64727 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
VclQ64727 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
VclQ64727 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
VclQ64727 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
VclQ64727 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
VclQ64727 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
VclQ64727 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
VclQ64727 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
VclQ64727 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
VclQ64727 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms