Protein–RNA interactions for Protein: Q62205

Scn9a, Sodium channel protein type 9 subunit alpha, mousemouse

Predictions only

Length 1,984 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9aQ62205 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Scn9aQ62205 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC15.08■□□□□ 0
Scn9aQ62205 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC15.08■□□□□ 0
Scn9aQ62205 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC15.08■□□□□ 0
Scn9aQ62205 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Scn9aQ62205 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Scn9aQ62205 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC15.07■□□□□ 0
Scn9aQ62205 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Scn9aQ62205 Gm14058-201ENSMUST00000116082 735 ntBASIC15.07■□□□□ 0
Scn9aQ62205 Gm14644-201ENSMUST00000116671 647 ntBASIC15.07■□□□□ 0
Scn9aQ62205 Gm12314-201ENSMUST00000118104 538 ntBASIC15.07■□□□□ 0
Scn9aQ62205 Gm14921-201ENSMUST00000118643 908 ntBASIC15.07■□□□□ 0
Scn9aQ62205 Gm13394-201ENSMUST00000121658 1000 ntBASIC15.07■□□□□ 0
Scn9aQ62205 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC15.07■□□□□ 0
Scn9aQ62205 Gm16347-202ENSMUST00000149000 772 ntTSL 3 BASIC15.07■□□□□ 0
Scn9aQ62205 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC15.07■□□□□ 0
Scn9aQ62205 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Scn9aQ62205 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC15.07■□□□□ 0
Scn9aQ62205 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC15.07■□□□□ 0
Scn9aQ62205 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC15.07■□□□□ 0
Scn9aQ62205 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC15.07■□□□□ 0
Scn9aQ62205 Sat1-201ENSMUST00000026318 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Scn9aQ62205 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Scn9aQ62205 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC15.07■□□□□ 0
Scn9aQ62205 Gm14150-201ENSMUST00000122404 1354 ntBASIC15.07■□□□□ 0
Scn9aQ62205 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
Scn9aQ62205 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC15.07■□□□□ 0
Scn9aQ62205 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC15.07■□□□□ 0
Scn9aQ62205 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Scn9aQ62205 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Scn9aQ62205 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC15.07■□□□□ 0
Scn9aQ62205 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC15.07■□□□□ 0
Scn9aQ62205 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Scn9aQ62205 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC15.07■□□□□ 0
Scn9aQ62205 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Scn9aQ62205 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Scn9aQ62205 Gm44401-201ENSMUST00000204462 2375 ntBASIC15.07■□□□□ 0
Scn9aQ62205 Cspp1-204ENSMUST00000119714 1268 ntTSL 1 (best) BASIC15.07■□□□□ 0
Scn9aQ62205 Mrpl30-201ENSMUST00000027256 969 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Scn9aQ62205 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Scn9aQ62205 Rsg1-201ENSMUST00000097813 985 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Scn9aQ62205 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Scn9aQ62205 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC15.07■□□□□ 0
Scn9aQ62205 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Scn9aQ62205 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
Scn9aQ62205 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Scn9aQ62205 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Scn9aQ62205 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Scn9aQ62205 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Scn9aQ62205 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Scn9aQ62205 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Scn9aQ62205 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
Scn9aQ62205 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Scn9aQ62205 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Scn9aQ62205 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Scn9aQ62205 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC15.06■□□□□ 0
Scn9aQ62205 Gsdmcl-ps-203ENSMUST00000188367 1375 ntBASIC15.06■□□□□ 0
Scn9aQ62205 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC15.06■□□□□ 0
Scn9aQ62205 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC15.06■□□□□ 0
Scn9aQ62205 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC15.06■□□□□ 0
Scn9aQ62205 Aamdc-213ENSMUST00000154853 883 ntTSL 1 (best) BASIC15.06■□□□□ 0
Scn9aQ62205 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC15.06■□□□□ 0
Scn9aQ62205 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC15.06■□□□□ 0
Scn9aQ62205 Cmtm2a-201ENSMUST00000034344 1081 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Scn9aQ62205 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Scn9aQ62205 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Scn9aQ62205 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC15.06■□□□□ 0
Scn9aQ62205 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Scn9aQ62205 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Scn9aQ62205 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC15.06■□□□□ 0
Scn9aQ62205 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Scn9aQ62205 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Scn9aQ62205 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC15.06■□□□□ 0
Scn9aQ62205 AC137842.1-201ENSMUST00000227896 2064 ntBASIC15.06■□□□□ 0
Scn9aQ62205 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Scn9aQ62205 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC15.06■□□□□ 0
Scn9aQ62205 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Scn9aQ62205 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Scn9aQ62205 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC15.06■□□□□ 0
Scn9aQ62205 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Scn9aQ62205 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC15.05■□□□□ 0
Scn9aQ62205 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC15.05■□□□□ 0
Scn9aQ62205 Gm12196-201ENSMUST00000120954 262 ntBASIC15.05■□□□□ 0
Scn9aQ62205 B230119M05Rik-201ENSMUST00000154072 979 ntTSL 1 (best) BASIC15.05■□□□□ 0
Scn9aQ62205 Hsh2d-202ENSMUST00000165324 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Scn9aQ62205 Coa3-202ENSMUST00000168089 291 ntTSL 3 BASIC15.05■□□□□ 0
Scn9aQ62205 Gm8494-201ENSMUST00000178171 1233 ntBASIC15.05■□□□□ 0
Scn9aQ62205 Gm28215-201ENSMUST00000186146 346 ntTSL 5 BASIC15.05■□□□□ 0
Scn9aQ62205 Mir7686-201ENSMUST00000200604 57 ntBASIC15.05■□□□□ 0
Scn9aQ62205 Gm19287-201ENSMUST00000203190 358 ntBASIC15.05■□□□□ 0
Scn9aQ62205 Gm1821-202ENSMUST00000227415 750 ntBASIC15.05■□□□□ 0
Scn9aQ62205 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Scn9aQ62205 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
Scn9aQ62205 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Scn9aQ62205 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Scn9aQ62205 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Scn9aQ62205 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Scn9aQ62205 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Scn9aQ62205 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Scn9aQ62205 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC15.05■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 53.1 ms