Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ift88Q61371 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ift88Q61371 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Ift88Q61371 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ift88Q61371 Gm43045-201ENSMUST00000198725 2095 ntBASIC14.47□□□□□ -0.09
Ift88Q61371 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ift88Q61371 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Ift88Q61371 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Ift88Q61371 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Ift88Q61371 Gm44985-201ENSMUST00000206202 1016 ntBASIC14.47□□□□□ -0.09
Ift88Q61371 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC14.47□□□□□ -0.09
Ift88Q61371 AC155258.1-201ENSMUST00000219303 253 ntBASIC14.47□□□□□ -0.09
Ift88Q61371 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC14.47□□□□□ -0.09
Ift88Q61371 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC14.47□□□□□ -0.09
Ift88Q61371 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ift88Q61371 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Ift88Q61371 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Ift88Q61371 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ift88Q61371 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ift88Q61371 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ift88Q61371 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ift88Q61371 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ift88Q61371 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Ift88Q61371 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Ift88Q61371 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC14.46□□□□□ -0.09
Ift88Q61371 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ift88Q61371 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ift88Q61371 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Ift88Q61371 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Ift88Q61371 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ift88Q61371 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC14.46□□□□□ -0.09
Ift88Q61371 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ift88Q61371 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC14.46□□□□□ -0.09
Ift88Q61371 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC14.46□□□□□ -0.09
Ift88Q61371 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ift88Q61371 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
Ift88Q61371 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC14.46□□□□□ -0.09
Ift88Q61371 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ift88Q61371 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Ift88Q61371 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ift88Q61371 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ift88Q61371 Rn7sk-201ENSMUST00000083103 331 ntBASIC14.46□□□□□ -0.09
Ift88Q61371 Gm26315-201ENSMUST00000083890 321 ntBASIC14.46□□□□□ -0.09
Ift88Q61371 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Ift88Q61371 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ift88Q61371 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Ift88Q61371 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Ift88Q61371 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Ift88Q61371 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Ift88Q61371 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Ift88Q61371 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Ift88Q61371 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC14.45□□□□□ -0.1
Ift88Q61371 Zkscan3-207ENSMUST00000223831 2101 ntBASIC14.45□□□□□ -0.1
Ift88Q61371 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ift88Q61371 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Ift88Q61371 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Ift88Q61371 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Ift88Q61371 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC14.45□□□□□ -0.1
Ift88Q61371 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Ift88Q61371 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Ift88Q61371 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ift88Q61371 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ift88Q61371 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ift88Q61371 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC14.45□□□□□ -0.1
Ift88Q61371 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Ift88Q61371 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ift88Q61371 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Ift88Q61371 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ift88Q61371 Gm28760-201ENSMUST00000185995 736 ntBASIC14.45□□□□□ -0.1
Ift88Q61371 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Ift88Q61371 AC138604.1-201ENSMUST00000226969 739 ntBASIC14.45□□□□□ -0.1
Ift88Q61371 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ift88Q61371 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Ift88Q61371 Hist1h2al-201ENSMUST00000091708 339 ntBASIC14.45□□□□□ -0.1
Ift88Q61371 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ift88Q61371 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ift88Q61371 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ift88Q61371 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC14.45□□□□□ -0.1
Ift88Q61371 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC14.45□□□□□ -0.1
Ift88Q61371 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ift88Q61371 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Ift88Q61371 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ift88Q61371 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ift88Q61371 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ift88Q61371 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Ift88Q61371 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC14.44□□□□□ -0.1
Ift88Q61371 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ift88Q61371 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ift88Q61371 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ift88Q61371 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ift88Q61371 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ift88Q61371 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Ift88Q61371 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Ift88Q61371 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC14.44□□□□□ -0.1
Ift88Q61371 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Ift88Q61371 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Ift88Q61371 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Ift88Q61371 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Ift88Q61371 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC14.44□□□□□ -0.1
Ift88Q61371 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms