Protein–RNA interactions for Protein: Q61124

Cln3, Battenin, mousemouse

Predictions only

Length 438 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cln3Q61124 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cln3Q61124 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cln3Q61124 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Cln3Q61124 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cln3Q61124 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cln3Q61124 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cln3Q61124 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cln3Q61124 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cln3Q61124 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cln3Q61124 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC14.28□□□□□ -0.12
Cln3Q61124 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Cln3Q61124 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cln3Q61124 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cln3Q61124 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cln3Q61124 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Cln3Q61124 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Cln3Q61124 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Cln3Q61124 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Cln3Q61124 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC14.27□□□□□ -0.12
Cln3Q61124 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cln3Q61124 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Cln3Q61124 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cln3Q61124 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cln3Q61124 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cln3Q61124 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cln3Q61124 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cln3Q61124 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Cln3Q61124 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.12
Cln3Q61124 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Cln3Q61124 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Cln3Q61124 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
Cln3Q61124 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.13
Cln3Q61124 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC14.27□□□□□ -0.13
Cln3Q61124 Gm7857-201ENSMUST00000117957 358 ntBASIC14.27□□□□□ -0.13
Cln3Q61124 Gm12291-201ENSMUST00000121627 311 ntBASIC14.27□□□□□ -0.13
Cln3Q61124 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Cln3Q61124 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Cln3Q61124 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cln3Q61124 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Cln3Q61124 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cln3Q61124 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC14.27□□□□□ -0.13
Cln3Q61124 Gm19931-201ENSMUST00000198920 368 ntBASIC14.27□□□□□ -0.13
Cln3Q61124 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC14.27□□□□□ -0.13
Cln3Q61124 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC14.27□□□□□ -0.13
Cln3Q61124 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Cln3Q61124 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Cln3Q61124 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cln3Q61124 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Cln3Q61124 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cln3Q61124 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC14.27□□□□□ -0.13
Cln3Q61124 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cln3Q61124 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cln3Q61124 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cln3Q61124 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cln3Q61124 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Cln3Q61124 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cln3Q61124 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cln3Q61124 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cln3Q61124 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Cln3Q61124 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cln3Q61124 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cln3Q61124 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Cln3Q61124 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cln3Q61124 Gm4864-201ENSMUST00000219894 1461 ntBASIC14.26□□□□□ -0.13
Cln3Q61124 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Cln3Q61124 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Cln3Q61124 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Cln3Q61124 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC14.26□□□□□ -0.13
Cln3Q61124 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cln3Q61124 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Cln3Q61124 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC14.26□□□□□ -0.13
Cln3Q61124 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Cln3Q61124 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC14.26□□□□□ -0.13
Cln3Q61124 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC14.26□□□□□ -0.13
Cln3Q61124 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC14.26□□□□□ -0.13
Cln3Q61124 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC14.26□□□□□ -0.13
Cln3Q61124 Gm45925-201ENSMUST00000218882 744 ntBASIC14.26□□□□□ -0.13
Cln3Q61124 Abhd11os-203ENSMUST00000222613 363 ntBASIC14.26□□□□□ -0.13
Cln3Q61124 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Cln3Q61124 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cln3Q61124 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cln3Q61124 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cln3Q61124 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cln3Q61124 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Cln3Q61124 Gm10701-201ENSMUST00000098926 906 ntTSL 2 BASIC14.26□□□□□ -0.13
Cln3Q61124 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cln3Q61124 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cln3Q61124 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Cln3Q61124 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cln3Q61124 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Cln3Q61124 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Cln3Q61124 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cln3Q61124 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cln3Q61124 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cln3Q61124 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cln3Q61124 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cln3Q61124 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cln3Q61124 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cln3Q61124 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
Cln3Q61124 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 45.1 ms