Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rc3h1Q4VGL6 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Rc3h1Q4VGL6 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Rc3h1Q4VGL6 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC15.1■□□□□ 0.01
Rc3h1Q4VGL6 Gm9061-201ENSMUST00000182707 1006 ntBASIC15.1■□□□□ 0.01
Rc3h1Q4VGL6 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC15.1■□□□□ 0.01
Rc3h1Q4VGL6 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC15.1■□□□□ 0.01
Rc3h1Q4VGL6 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC15.1■□□□□ 0.01
Rc3h1Q4VGL6 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC15.1■□□□□ 0.01
Rc3h1Q4VGL6 Gm7172-201ENSMUST00000218047 1152 ntBASIC15.1■□□□□ 0.01
Rc3h1Q4VGL6 AC069562.3-201ENSMUST00000225387 587 ntBASIC15.1■□□□□ 0.01
Rc3h1Q4VGL6 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rc3h1Q4VGL6 Gm38577-201ENSMUST00000221531 4545 ntBASIC15.1■□□□□ 0.01
Rc3h1Q4VGL6 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC15.1■□□□□ 0.01
Rc3h1Q4VGL6 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rc3h1Q4VGL6 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rc3h1Q4VGL6 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Rc3h1Q4VGL6 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rc3h1Q4VGL6 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rc3h1Q4VGL6 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Rc3h1Q4VGL6 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rc3h1Q4VGL6 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Rc3h1Q4VGL6 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Rc3h1Q4VGL6 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rc3h1Q4VGL6 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Rc3h1Q4VGL6 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rc3h1Q4VGL6 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rc3h1Q4VGL6 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Rc3h1Q4VGL6 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rc3h1Q4VGL6 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rc3h1Q4VGL6 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC15.09■□□□□ 0.01
Rc3h1Q4VGL6 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Rc3h1Q4VGL6 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rc3h1Q4VGL6 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Rc3h1Q4VGL6 Gm43822-201ENSMUST00000200285 476 ntBASIC15.09■□□□□ 0.01
Rc3h1Q4VGL6 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC15.09■□□□□ 0.01
Rc3h1Q4VGL6 Cts7-204ENSMUST00000225321 1257 ntBASIC15.09■□□□□ 0.01
Rc3h1Q4VGL6 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rc3h1Q4VGL6 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Rc3h1Q4VGL6 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rc3h1Q4VGL6 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rc3h1Q4VGL6 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Rc3h1Q4VGL6 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rc3h1Q4VGL6 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rc3h1Q4VGL6 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Rc3h1Q4VGL6 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC15.09■□□□□ 0.01
Rc3h1Q4VGL6 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC15.09■□□□□ 0.01
Rc3h1Q4VGL6 Gm9947-201ENSMUST00000067599 2920 ntBASIC15.09■□□□□ 0.01
Rc3h1Q4VGL6 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC15.09■□□□□ 0.01
Rc3h1Q4VGL6 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Rc3h1Q4VGL6 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Rc3h1Q4VGL6 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC15.08■□□□□ 0.01
Rc3h1Q4VGL6 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Rc3h1Q4VGL6 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0.01
Rc3h1Q4VGL6 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Rc3h1Q4VGL6 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Rc3h1Q4VGL6 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Rc3h1Q4VGL6 Gm6198-201ENSMUST00000191337 2929 ntBASIC15.08■□□□□ 0
Rc3h1Q4VGL6 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Rc3h1Q4VGL6 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC15.08■□□□□ 0
Rc3h1Q4VGL6 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC15.08■□□□□ 0
Rc3h1Q4VGL6 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC15.08■□□□□ 0
Rc3h1Q4VGL6 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC15.08■□□□□ 0
Rc3h1Q4VGL6 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Rc3h1Q4VGL6 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Rc3h1Q4VGL6 Gm15370-201ENSMUST00000117158 253 ntBASIC15.08■□□□□ 0
Rc3h1Q4VGL6 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC15.08■□□□□ 0
Rc3h1Q4VGL6 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC15.08■□□□□ 0
Rc3h1Q4VGL6 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC15.08■□□□□ 0
Rc3h1Q4VGL6 Gm7584-201ENSMUST00000175829 940 ntBASIC15.08■□□□□ 0
Rc3h1Q4VGL6 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC15.08■□□□□ 0
Rc3h1Q4VGL6 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC15.08■□□□□ 0
Rc3h1Q4VGL6 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC15.08■□□□□ 0
Rc3h1Q4VGL6 Gm38319-201ENSMUST00000194537 1266 ntBASIC15.08■□□□□ 0
Rc3h1Q4VGL6 Gm19931-201ENSMUST00000198920 368 ntBASIC15.08■□□□□ 0
Rc3h1Q4VGL6 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC15.08■□□□□ 0
Rc3h1Q4VGL6 Gm45865-201ENSMUST00000211815 945 ntBASIC15.08■□□□□ 0
Rc3h1Q4VGL6 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Rc3h1Q4VGL6 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Rc3h1Q4VGL6 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Rc3h1Q4VGL6 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Rc3h1Q4VGL6 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Rc3h1Q4VGL6 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC15.08■□□□□ 0
Rc3h1Q4VGL6 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC15.08■□□□□ 0
Rc3h1Q4VGL6 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC15.08■□□□□ 0
Rc3h1Q4VGL6 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC15.08■□□□□ 0
Rc3h1Q4VGL6 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC15.08■□□□□ 0
Rc3h1Q4VGL6 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Rc3h1Q4VGL6 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Rc3h1Q4VGL6 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC15.08■□□□□ 0
Rc3h1Q4VGL6 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC15.07■□□□□ 0
Rc3h1Q4VGL6 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Rc3h1Q4VGL6 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC15.07■□□□□ 0
Rc3h1Q4VGL6 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Rc3h1Q4VGL6 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Rc3h1Q4VGL6 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC15.07■□□□□ 0
Rc3h1Q4VGL6 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Rc3h1Q4VGL6 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC15.07■□□□□ 0
Rc3h1Q4VGL6 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Rc3h1Q4VGL6 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 54.4 ms