Protein–RNA interactions for Protein: Q3TR08

Fndc4, Fibronectin type III domain-containing protein 4, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fndc4Q3TR08 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Fndc4Q3TR08 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Fndc4Q3TR08 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Fndc4Q3TR08 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC11.16□□□□□ -0.62
Fndc4Q3TR08 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Fndc4Q3TR08 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Fndc4Q3TR08 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Fndc4Q3TR08 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Fndc4Q3TR08 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Fndc4Q3TR08 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Fndc4Q3TR08 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Fndc4Q3TR08 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Fndc4Q3TR08 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC11.16□□□□□ -0.62
Fndc4Q3TR08 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Fndc4Q3TR08 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Fndc4Q3TR08 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Fndc4Q3TR08 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Fndc4Q3TR08 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
Fndc4Q3TR08 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC11.16□□□□□ -0.62
Fndc4Q3TR08 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC11.16□□□□□ -0.62
Fndc4Q3TR08 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Fndc4Q3TR08 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC11.16□□□□□ -0.62
Fndc4Q3TR08 Gm6912-201ENSMUST00000117218 544 ntBASIC11.16□□□□□ -0.62
Fndc4Q3TR08 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Fndc4Q3TR08 Gm14719-201ENSMUST00000121891 340 ntBASIC11.16□□□□□ -0.62
Fndc4Q3TR08 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC11.16□□□□□ -0.62
Fndc4Q3TR08 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Fndc4Q3TR08 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC11.16□□□□□ -0.62
Fndc4Q3TR08 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC11.16□□□□□ -0.62
Fndc4Q3TR08 Gm10576-201ENSMUST00000191927 825 ntBASIC11.16□□□□□ -0.62
Fndc4Q3TR08 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC11.16□□□□□ -0.62
Fndc4Q3TR08 AC154621.1-201ENSMUST00000226155 1119 ntBASIC11.16□□□□□ -0.62
Fndc4Q3TR08 AC132863.2-201ENSMUST00000226643 799 ntBASIC11.16□□□□□ -0.62
Fndc4Q3TR08 Wdyhv1-203ENSMUST00000226889 394 ntBASIC11.16□□□□□ -0.62
Fndc4Q3TR08 AC131997.1-201ENSMUST00000228611 1229 ntBASIC11.16□□□□□ -0.62
Fndc4Q3TR08 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Fndc4Q3TR08 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Fndc4Q3TR08 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Fndc4Q3TR08 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Fndc4Q3TR08 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Fndc4Q3TR08 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Fndc4Q3TR08 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Fndc4Q3TR08 Gm43134-201ENSMUST00000199434 1886 ntBASIC11.16□□□□□ -0.62
Fndc4Q3TR08 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Fndc4Q3TR08 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Fndc4Q3TR08 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Fndc4Q3TR08 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC11.16□□□□□ -0.62
Fndc4Q3TR08 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Fndc4Q3TR08 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Fndc4Q3TR08 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC11.16□□□□□ -0.62
Fndc4Q3TR08 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Fndc4Q3TR08 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Fndc4Q3TR08 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Fndc4Q3TR08 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Fndc4Q3TR08 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC11.16□□□□□ -0.62
Fndc4Q3TR08 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Fndc4Q3TR08 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC11.16□□□□□ -0.62
Fndc4Q3TR08 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC11.16□□□□□ -0.62
Fndc4Q3TR08 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Fndc4Q3TR08 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC11.15□□□□□ -0.62
Fndc4Q3TR08 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Fndc4Q3TR08 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Fndc4Q3TR08 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC11.15□□□□□ -0.62
Fndc4Q3TR08 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Fndc4Q3TR08 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Fndc4Q3TR08 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Fndc4Q3TR08 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Fndc4Q3TR08 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC11.15□□□□□ -0.62
Fndc4Q3TR08 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Fndc4Q3TR08 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Fndc4Q3TR08 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
Fndc4Q3TR08 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Fndc4Q3TR08 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC11.15□□□□□ -0.62
Fndc4Q3TR08 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC11.15□□□□□ -0.62
Fndc4Q3TR08 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC11.15□□□□□ -0.62
Fndc4Q3TR08 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Fndc4Q3TR08 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC11.15□□□□□ -0.62
Fndc4Q3TR08 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC11.15□□□□□ -0.62
Fndc4Q3TR08 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC11.15□□□□□ -0.62
Fndc4Q3TR08 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Fndc4Q3TR08 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Fndc4Q3TR08 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Fndc4Q3TR08 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC11.15□□□□□ -0.62
Fndc4Q3TR08 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Fndc4Q3TR08 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC11.15□□□□□ -0.62
Fndc4Q3TR08 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Fndc4Q3TR08 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC11.15□□□□□ -0.62
Fndc4Q3TR08 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Fndc4Q3TR08 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Fndc4Q3TR08 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Fndc4Q3TR08 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
Fndc4Q3TR08 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC11.15□□□□□ -0.62
Fndc4Q3TR08 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Fndc4Q3TR08 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Fndc4Q3TR08 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Fndc4Q3TR08 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Fndc4Q3TR08 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC11.15□□□□□ -0.62
Fndc4Q3TR08 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC11.15□□□□□ -0.62
Fndc4Q3TR08 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Fndc4Q3TR08 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms