Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Pcdhb2-201ENSMUST00000056522 2813 ntAPPRIS P1 BASIC10.71□□□□□ -0.7
Trim63Q38HM4 Fntb-201ENSMUST00000041008 2613 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
Trim63Q38HM4 Hnrnph2-203ENSMUST00000074950 2426 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trim63Q38HM4 Prx-201ENSMUST00000065487 4497 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Trim63Q38HM4 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC10.7□□□□□ -0.7
Trim63Q38HM4 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trim63Q38HM4 Rab14-202ENSMUST00000113025 4346 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Trim63Q38HM4 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trim63Q38HM4 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Trim63Q38HM4 Sorcs1-202ENSMUST00000111756 3617 ntAPPRIS ALT1 TSL 5 BASIC10.7□□□□□ -0.7
Trim63Q38HM4 Sorcs1-207ENSMUST00000211008 3617 ntAPPRIS ALT1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trim63Q38HM4 Smchd1-201ENSMUST00000127430 7052 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Trim63Q38HM4 Parp11-202ENSMUST00000112191 3414 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Trim63Q38HM4 Gm14452-201ENSMUST00000118680 1632 ntBASIC10.7□□□□□ -0.7
Trim63Q38HM4 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC10.7□□□□□ -0.7
Trim63Q38HM4 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trim63Q38HM4 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trim63Q38HM4 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Trim63Q38HM4 AC164565.1-201ENSMUST00000217520 1484 ntBASIC10.7□□□□□ -0.7
Trim63Q38HM4 Acacb-202ENSMUST00000102582 8788 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Trim63Q38HM4 Gm43984-201ENSMUST00000204572 2864 ntBASIC10.7□□□□□ -0.7
Trim63Q38HM4 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trim63Q38HM4 Arid2-201ENSMUST00000096250 8507 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Trim63Q38HM4 Phip-201ENSMUST00000034787 10756 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trim63Q38HM4 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trim63Q38HM4 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC10.7□□□□□ -0.7
Trim63Q38HM4 Gm13436-201ENSMUST00000120418 567 ntBASIC10.7□□□□□ -0.7
Trim63Q38HM4 Gm11860-201ENSMUST00000122346 1010 ntBASIC10.7□□□□□ -0.7
Trim63Q38HM4 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC10.7□□□□□ -0.7
Trim63Q38HM4 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC10.7□□□□□ -0.7
Trim63Q38HM4 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC10.7□□□□□ -0.7
Trim63Q38HM4 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
Trim63Q38HM4 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC10.7□□□□□ -0.7
Trim63Q38HM4 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC10.7□□□□□ -0.7
Trim63Q38HM4 Gm18959-201ENSMUST00000208954 655 ntBASIC10.7□□□□□ -0.7
Trim63Q38HM4 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trim63Q38HM4 Gm21559-201ENSMUST00000220638 855 ntBASIC10.7□□□□□ -0.7
Trim63Q38HM4 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC10.7□□□□□ -0.7
Trim63Q38HM4 CT030704.2-201ENSMUST00000228887 494 ntBASIC10.7□□□□□ -0.7
Trim63Q38HM4 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trim63Q38HM4 Gm8587-201ENSMUST00000076538 843 ntBASIC10.7□□□□□ -0.7
Trim63Q38HM4 Gm38115-201ENSMUST00000194317 2413 ntTSL 5 BASIC10.7□□□□□ -0.7
Trim63Q38HM4 Armt1-201ENSMUST00000095893 2429 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trim63Q38HM4 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Trim63Q38HM4 Smarca2-201ENSMUST00000025862 5921 ntAPPRIS P2 TSL 5 BASIC10.7□□□□□ -0.7
Trim63Q38HM4 Kat6b-204ENSMUST00000182405 6977 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trim63Q38HM4 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC10.7□□□□□ -0.7
Trim63Q38HM4 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Trim63Q38HM4 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trim63Q38HM4 Polr3e-201ENSMUST00000033173 4194 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trim63Q38HM4 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
Trim63Q38HM4 Gm36987-201ENSMUST00000194704 2979 ntBASIC10.7□□□□□ -0.7
Trim63Q38HM4 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Trim63Q38HM4 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Trim63Q38HM4 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC10.7□□□□□ -0.7
Trim63Q38HM4 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trim63Q38HM4 Dcun1d2-201ENSMUST00000045366 2748 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trim63Q38HM4 Pcdhb19-201ENSMUST00000059571 7138 ntAPPRIS P1 BASIC10.7□□□□□ -0.7
Trim63Q38HM4 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Trim63Q38HM4 Sap18-204ENSMUST00000128764 5125 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trim63Q38HM4 AC130669.1-201ENSMUST00000228537 1672 ntBASIC10.69□□□□□ -0.7
Trim63Q38HM4 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trim63Q38HM4 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Trim63Q38HM4 Tom1l2-203ENSMUST00000093048 4864 ntTSL 5 BASIC10.69□□□□□ -0.7
Trim63Q38HM4 Slc45a4-201ENSMUST00000054266 4664 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
Trim63Q38HM4 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trim63Q38HM4 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Trim63Q38HM4 Tiam2-202ENSMUST00000169838 5725 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trim63Q38HM4 Itsn2-211ENSMUST00000219007 4977 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trim63Q38HM4 Gm38140-201ENSMUST00000193617 2755 ntBASIC10.69□□□□□ -0.7
Trim63Q38HM4 Ddx55-201ENSMUST00000071057 2799 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trim63Q38HM4 Gm42498-201ENSMUST00000199981 1372 ntBASIC10.69□□□□□ -0.7
Trim63Q38HM4 C230024C17Rik-201ENSMUST00000190663 3337 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Trim63Q38HM4 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC10.69□□□□□ -0.7
Trim63Q38HM4 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trim63Q38HM4 Mir770-201ENSMUST00000103252 94 ntBASIC10.69□□□□□ -0.7
Trim63Q38HM4 Gm16140-201ENSMUST00000117191 1060 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Trim63Q38HM4 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC10.69□□□□□ -0.7
Trim63Q38HM4 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Trim63Q38HM4 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC10.69□□□□□ -0.7
Trim63Q38HM4 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
Trim63Q38HM4 Gm37230-201ENSMUST00000194491 818 ntBASIC10.69□□□□□ -0.7
Trim63Q38HM4 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC10.69□□□□□ -0.7
Trim63Q38HM4 AC134329.2-201ENSMUST00000217897 428 ntBASIC10.69□□□□□ -0.7
Trim63Q38HM4 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trim63Q38HM4 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trim63Q38HM4 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trim63Q38HM4 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Trim63Q38HM4 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trim63Q38HM4 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC10.69□□□□□ -0.7
Trim63Q38HM4 Fgl2-201ENSMUST00000035799 3788 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trim63Q38HM4 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Trim63Q38HM4 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trim63Q38HM4 Pknox1-206ENSMUST00000176701 4232 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trim63Q38HM4 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC10.69□□□□□ -0.7
Trim63Q38HM4 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trim63Q38HM4 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trim63Q38HM4 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC10.69□□□□□ -0.7
Trim63Q38HM4 Arpp21-223ENSMUST00000162097 3952 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Trim63Q38HM4 AC154639.1-201ENSMUST00000224393 2849 ntBASIC10.69□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 48.7 ms