Protein–RNA interactions for Protein: P70390

Shox2, Short stature homeobox protein 2, mousemouse

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shox2P70390 AC154222.1-201ENSMUST00000223882 475 ntBASIC12.91□□□□□ -0.34
Shox2P70390 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Shox2P70390 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Shox2P70390 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Shox2P70390 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC12.91□□□□□ -0.34
Shox2P70390 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Shox2P70390 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Shox2P70390 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Shox2P70390 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Shox2P70390 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Shox2P70390 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Shox2P70390 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Shox2P70390 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Shox2P70390 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Shox2P70390 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Shox2P70390 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC12.9□□□□□ -0.34
Shox2P70390 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Shox2P70390 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Shox2P70390 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Shox2P70390 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Shox2P70390 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC12.9□□□□□ -0.34
Shox2P70390 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC12.9□□□□□ -0.34
Shox2P70390 Gm5320-201ENSMUST00000207163 1519 ntBASIC12.9□□□□□ -0.34
Shox2P70390 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Shox2P70390 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Shox2P70390 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC12.9□□□□□ -0.34
Shox2P70390 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
Shox2P70390 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Shox2P70390 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC12.9□□□□□ -0.34
Shox2P70390 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Shox2P70390 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Shox2P70390 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Shox2P70390 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Shox2P70390 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC12.9□□□□□ -0.34
Shox2P70390 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Shox2P70390 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC12.9□□□□□ -0.34
Shox2P70390 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Shox2P70390 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Shox2P70390 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Shox2P70390 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
Shox2P70390 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Shox2P70390 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Shox2P70390 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Shox2P70390 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Shox2P70390 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Shox2P70390 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Shox2P70390 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Shox2P70390 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Shox2P70390 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Shox2P70390 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Shox2P70390 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Shox2P70390 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Shox2P70390 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC12.89□□□□□ -0.35
Shox2P70390 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Shox2P70390 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Shox2P70390 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Shox2P70390 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Shox2P70390 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Shox2P70390 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Shox2P70390 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC12.89□□□□□ -0.35
Shox2P70390 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
Shox2P70390 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Shox2P70390 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC12.89□□□□□ -0.35
Shox2P70390 Gm10766-202ENSMUST00000194123 606 ntBASIC12.89□□□□□ -0.35
Shox2P70390 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC12.89□□□□□ -0.35
Shox2P70390 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC12.89□□□□□ -0.35
Shox2P70390 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC12.89□□□□□ -0.35
Shox2P70390 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Shox2P70390 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC12.89□□□□□ -0.35
Shox2P70390 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Shox2P70390 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Shox2P70390 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Shox2P70390 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Shox2P70390 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Shox2P70390 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Shox2P70390 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Shox2P70390 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Shox2P70390 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Shox2P70390 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Shox2P70390 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC12.88□□□□□ -0.35
Shox2P70390 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Shox2P70390 AC161252.3-201ENSMUST00000225465 1549 ntBASIC12.88□□□□□ -0.35
Shox2P70390 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Shox2P70390 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Shox2P70390 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Shox2P70390 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Shox2P70390 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Shox2P70390 Gm15991-202ENSMUST00000212123 3565 ntBASIC12.88□□□□□ -0.35
Shox2P70390 Gm43321-201ENSMUST00000198897 2409 ntBASIC12.88□□□□□ -0.35
Shox2P70390 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC12.88□□□□□ -0.35
Shox2P70390 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Shox2P70390 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Shox2P70390 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Shox2P70390 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Shox2P70390 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Shox2P70390 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC12.88□□□□□ -0.35
Shox2P70390 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Shox2P70390 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Shox2P70390 Gm45612-201ENSMUST00000211320 160 ntBASIC12.88□□□□□ -0.35
Shox2P70390 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC12.88□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms