Protein–RNA interactions for Protein: P70298

Cux2, Homeobox protein cut-like 2, mousemouse

Predictions only

Length 1,426 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux2P70298 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cux2P70298 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cux2P70298 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cux2P70298 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cux2P70298 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cux2P70298 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cux2P70298 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
Cux2P70298 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Cux2P70298 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC20.94■□□□□ 0.94
Cux2P70298 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cux2P70298 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC20.94■□□□□ 0.94
Cux2P70298 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cux2P70298 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC20.94■□□□□ 0.94
Cux2P70298 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Cux2P70298 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cux2P70298 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Cux2P70298 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Cux2P70298 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cux2P70298 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC20.94■□□□□ 0.94
Cux2P70298 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Cux2P70298 Ighv1-48-201ENSMUST00000191795 294 ntBASIC20.94■□□□□ 0.94
Cux2P70298 Gm45717-201ENSMUST00000211129 495 ntAPPRIS P1 TSL 3 BASIC20.94■□□□□ 0.94
Cux2P70298 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cux2P70298 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC20.94■□□□□ 0.94
Cux2P70298 1700012P22Rik-201ENSMUST00000030323 974 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cux2P70298 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cux2P70298 Gm9962-201ENSMUST00000085241 321 ntTSL 5 BASIC20.94■□□□□ 0.94
Cux2P70298 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cux2P70298 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cux2P70298 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Cux2P70298 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cux2P70298 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cux2P70298 Gm44094-201ENSMUST00000204703 2030 ntBASIC20.93■□□□□ 0.94
Cux2P70298 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC20.93■□□□□ 0.94
Cux2P70298 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cux2P70298 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cux2P70298 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cux2P70298 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cux2P70298 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cux2P70298 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cux2P70298 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC20.93■□□□□ 0.94
Cux2P70298 Gm13668-201ENSMUST00000119237 1001 ntBASIC20.93■□□□□ 0.94
Cux2P70298 Gm12969-201ENSMUST00000120199 1004 ntBASIC20.93■□□□□ 0.94
Cux2P70298 Gm25545-201ENSMUST00000122673 323 ntBASIC20.93■□□□□ 0.94
Cux2P70298 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC20.93■□□□□ 0.94
Cux2P70298 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC20.93■□□□□ 0.94
Cux2P70298 Gm2965-201ENSMUST00000198365 343 ntBASIC20.93■□□□□ 0.94
Cux2P70298 Gm19091-201ENSMUST00000208120 978 ntBASIC20.93■□□□□ 0.94
Cux2P70298 AC122408.1-201ENSMUST00000218949 218 ntBASIC20.93■□□□□ 0.94
Cux2P70298 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC20.93■□□□□ 0.94
Cux2P70298 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cux2P70298 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cux2P70298 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cux2P70298 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Cux2P70298 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cux2P70298 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cux2P70298 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cux2P70298 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC20.92■□□□□ 0.94
Cux2P70298 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC20.92■□□□□ 0.94
Cux2P70298 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cux2P70298 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
Cux2P70298 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Cux2P70298 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cux2P70298 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Cux2P70298 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cux2P70298 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cux2P70298 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cux2P70298 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cux2P70298 Mir8115-201ENSMUST00000184992 119 ntBASIC20.92■□□□□ 0.94
Cux2P70298 Gm28388-201ENSMUST00000186262 437 ntBASIC20.92■□□□□ 0.94
Cux2P70298 Gadd45a-206ENSMUST00000204282 460 ntTSL 5 BASIC20.92■□□□□ 0.94
Cux2P70298 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Cux2P70298 E230034D01Rik-201ENSMUST00000214440 1212 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Cux2P70298 AC153954.1-201ENSMUST00000216959 255 ntBASIC20.92■□□□□ 0.94
Cux2P70298 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Cux2P70298 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cux2P70298 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cux2P70298 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cux2P70298 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cux2P70298 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cux2P70298 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cux2P70298 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
Cux2P70298 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC20.91■□□□□ 0.94
Cux2P70298 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC20.91■□□□□ 0.94
Cux2P70298 Sln-201ENSMUST00000048485 1318 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cux2P70298 Gm13600-201ENSMUST00000117949 744 ntBASIC20.91■□□□□ 0.94
Cux2P70298 Gm15996-201ENSMUST00000161925 762 ntTSL 5 BASIC20.91■□□□□ 0.94
Cux2P70298 Ighv4-2-201ENSMUST00000192975 362 ntBASIC20.91■□□□□ 0.94
Cux2P70298 Gm42518-201ENSMUST00000196277 938 ntBASIC20.91■□□□□ 0.94
Cux2P70298 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Cux2P70298 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cux2P70298 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC20.91■□□□□ 0.94
Cux2P70298 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cux2P70298 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cux2P70298 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cux2P70298 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cux2P70298 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cux2P70298 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Cux2P70298 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cux2P70298 Gm11801-201ENSMUST00000117807 746 ntBASIC20.9■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms