Protein–RNA interactions for Protein: P61759

Vbp1, Prefoldin subunit 3, mousemouse

Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vbp1P61759 AC157950.1-201ENSMUST00000217561 2168 ntBASIC11.85□□□□□ -0.51
Vbp1P61759 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Vbp1P61759 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Vbp1P61759 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Vbp1P61759 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC11.85□□□□□ -0.51
Vbp1P61759 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Vbp1P61759 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Vbp1P61759 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC11.85□□□□□ -0.51
Vbp1P61759 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Vbp1P61759 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Vbp1P61759 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Vbp1P61759 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Vbp1P61759 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Vbp1P61759 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Vbp1P61759 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC11.84□□□□□ -0.51
Vbp1P61759 Gm43075-201ENSMUST00000198613 3905 ntBASIC11.84□□□□□ -0.51
Vbp1P61759 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Vbp1P61759 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Vbp1P61759 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Vbp1P61759 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Vbp1P61759 Pde3a-201ENSMUST00000043259 12302 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Vbp1P61759 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Vbp1P61759 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Vbp1P61759 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC11.84□□□□□ -0.51
Vbp1P61759 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Vbp1P61759 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC11.84□□□□□ -0.51
Vbp1P61759 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Vbp1P61759 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Vbp1P61759 Rpph1-201ENSMUST00000175096 319 ntBASIC11.84□□□□□ -0.51
Vbp1P61759 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC11.84□□□□□ -0.51
Vbp1P61759 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Vbp1P61759 Gm18636-201ENSMUST00000218846 1066 ntBASIC11.84□□□□□ -0.51
Vbp1P61759 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Vbp1P61759 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Vbp1P61759 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Vbp1P61759 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Vbp1P61759 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Vbp1P61759 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC11.84□□□□□ -0.51
Vbp1P61759 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Vbp1P61759 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Vbp1P61759 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Vbp1P61759 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC11.84□□□□□ -0.51
Vbp1P61759 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Vbp1P61759 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC11.84□□□□□ -0.51
Vbp1P61759 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Vbp1P61759 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Vbp1P61759 Gm42934-201ENSMUST00000196920 1345 ntBASIC11.84□□□□□ -0.51
Vbp1P61759 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Vbp1P61759 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Vbp1P61759 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Vbp1P61759 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC11.83□□□□□ -0.51
Vbp1P61759 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Vbp1P61759 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Vbp1P61759 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Vbp1P61759 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Vbp1P61759 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Vbp1P61759 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Vbp1P61759 Gm42943-201ENSMUST00000199676 3242 ntBASIC11.83□□□□□ -0.52
Vbp1P61759 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Vbp1P61759 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Vbp1P61759 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Vbp1P61759 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Vbp1P61759 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Vbp1P61759 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC11.83□□□□□ -0.52
Vbp1P61759 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC11.83□□□□□ -0.52
Vbp1P61759 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Vbp1P61759 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC11.83□□□□□ -0.52
Vbp1P61759 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC11.83□□□□□ -0.52
Vbp1P61759 Gm17968-201ENSMUST00000194902 784 ntBASIC11.83□□□□□ -0.52
Vbp1P61759 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC11.83□□□□□ -0.52
Vbp1P61759 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Vbp1P61759 Birc2-201ENSMUST00000054878 378 ntBASIC11.83□□□□□ -0.52
Vbp1P61759 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Vbp1P61759 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Vbp1P61759 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Vbp1P61759 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Vbp1P61759 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Vbp1P61759 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Vbp1P61759 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Vbp1P61759 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Vbp1P61759 Scn5a-202ENSMUST00000117911 8453 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Vbp1P61759 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Vbp1P61759 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Vbp1P61759 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Vbp1P61759 Gm26684-202ENSMUST00000228229 8257 ntBASIC11.83□□□□□ -0.52
Vbp1P61759 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC11.83□□□□□ -0.52
Vbp1P61759 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC11.83□□□□□ -0.52
Vbp1P61759 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Vbp1P61759 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Vbp1P61759 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Vbp1P61759 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Vbp1P61759 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Vbp1P61759 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Vbp1P61759 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Vbp1P61759 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Vbp1P61759 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Vbp1P61759 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Vbp1P61759 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
Vbp1P61759 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Vbp1P61759 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms