Protein–RNA interactions for Protein: P54729

Nub1, NEDD8 ultimate buster 1, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nub1P54729 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC14.1□□□□□ -0.15
Nub1P54729 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nub1P54729 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nub1P54729 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nub1P54729 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Nub1P54729 Gm43423-201ENSMUST00000198390 2094 ntBASIC14.1□□□□□ -0.15
Nub1P54729 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nub1P54729 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nub1P54729 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nub1P54729 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC14.1□□□□□ -0.15
Nub1P54729 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nub1P54729 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC14.1□□□□□ -0.15
Nub1P54729 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nub1P54729 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nub1P54729 Gm11803-201ENSMUST00000119966 444 ntBASIC14.1□□□□□ -0.15
Nub1P54729 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC14.1□□□□□ -0.15
Nub1P54729 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Nub1P54729 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC14.1□□□□□ -0.15
Nub1P54729 Gm9124-201ENSMUST00000191789 1092 ntBASIC14.1□□□□□ -0.15
Nub1P54729 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Nub1P54729 Gm9113-201ENSMUST00000192510 1018 ntBASIC14.1□□□□□ -0.15
Nub1P54729 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC14.1□□□□□ -0.15
Nub1P54729 Gm9131-201ENSMUST00000193557 1089 ntBASIC14.1□□□□□ -0.15
Nub1P54729 Gm9121-201ENSMUST00000193749 1071 ntBASIC14.1□□□□□ -0.15
Nub1P54729 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
Nub1P54729 Gm17794-201ENSMUST00000220252 955 ntBASIC14.1□□□□□ -0.15
Nub1P54729 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Nub1P54729 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nub1P54729 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nub1P54729 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nub1P54729 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nub1P54729 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nub1P54729 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nub1P54729 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Nub1P54729 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Nub1P54729 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Nub1P54729 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nub1P54729 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Nub1P54729 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nub1P54729 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Nub1P54729 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nub1P54729 Gm42928-201ENSMUST00000197338 3339 ntBASIC14.1□□□□□ -0.15
Nub1P54729 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Nub1P54729 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nub1P54729 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
Nub1P54729 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
Nub1P54729 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC14.09□□□□□ -0.15
Nub1P54729 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Nub1P54729 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nub1P54729 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nub1P54729 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nub1P54729 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC14.09□□□□□ -0.15
Nub1P54729 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nub1P54729 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Nub1P54729 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nub1P54729 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nub1P54729 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Nub1P54729 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Nub1P54729 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Nub1P54729 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nub1P54729 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nub1P54729 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nub1P54729 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Nub1P54729 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC14.09□□□□□ -0.15
Nub1P54729 Gm44069-201ENSMUST00000204898 506 ntBASIC14.09□□□□□ -0.15
Nub1P54729 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nub1P54729 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nub1P54729 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nub1P54729 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC14.09□□□□□ -0.15
Nub1P54729 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
Nub1P54729 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nub1P54729 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nub1P54729 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nub1P54729 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nub1P54729 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nub1P54729 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Nub1P54729 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Nub1P54729 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Nub1P54729 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Nub1P54729 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Nub1P54729 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC14.08□□□□□ -0.16
Nub1P54729 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nub1P54729 Gm43364-201ENSMUST00000196046 3274 ntBASIC14.08□□□□□ -0.16
Nub1P54729 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nub1P54729 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nub1P54729 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nub1P54729 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC14.08□□□□□ -0.16
Nub1P54729 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nub1P54729 Gm10156-201ENSMUST00000122364 462 ntBASIC14.08□□□□□ -0.16
Nub1P54729 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Nub1P54729 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC14.08□□□□□ -0.16
Nub1P54729 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC14.08□□□□□ -0.16
Nub1P54729 Gm8810-201ENSMUST00000172895 754 ntBASIC14.08□□□□□ -0.16
Nub1P54729 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC14.08□□□□□ -0.16
Nub1P54729 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC14.08□□□□□ -0.16
Nub1P54729 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Nub1P54729 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nub1P54729 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC14.08□□□□□ -0.16
Nub1P54729 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Nub1P54729 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms