Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sox1P53783 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Sox1P53783 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC13.3□□□□□ -0.28
Sox1P53783 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC13.3□□□□□ -0.28
Sox1P53783 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sox1P53783 Pstpip2-201ENSMUST00000114741 1395 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sox1P53783 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Sox1P53783 AC169511.2-201ENSMUST00000226674 2063 ntBASIC13.3□□□□□ -0.28
Sox1P53783 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sox1P53783 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sox1P53783 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sox1P53783 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sox1P53783 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sox1P53783 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sox1P53783 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sox1P53783 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Sox1P53783 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sox1P53783 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sox1P53783 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sox1P53783 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC13.29□□□□□ -0.28
Sox1P53783 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sox1P53783 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Sox1P53783 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sox1P53783 Gm23949-201ENSMUST00000104027 127 ntBASIC13.29□□□□□ -0.28
Sox1P53783 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sox1P53783 Rps9-203ENSMUST00000108624 478 ntTSL 5 BASIC13.29□□□□□ -0.28
Sox1P53783 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC13.29□□□□□ -0.28
Sox1P53783 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC13.29□□□□□ -0.28
Sox1P53783 Gm29615-201ENSMUST00000185371 697 ntBASIC13.29□□□□□ -0.28
Sox1P53783 Gm28224-201ENSMUST00000186078 697 ntBASIC13.29□□□□□ -0.28
Sox1P53783 Gm29001-201ENSMUST00000186177 697 ntBASIC13.29□□□□□ -0.28
Sox1P53783 Gm28292-201ENSMUST00000186593 697 ntBASIC13.29□□□□□ -0.28
Sox1P53783 Gm28101-201ENSMUST00000187608 697 ntBASIC13.29□□□□□ -0.28
Sox1P53783 Gm29076-201ENSMUST00000187689 697 ntBASIC13.29□□□□□ -0.28
Sox1P53783 Gm28302-201ENSMUST00000187931 697 ntBASIC13.29□□□□□ -0.28
Sox1P53783 Gm28646-201ENSMUST00000188220 697 ntBASIC13.29□□□□□ -0.28
Sox1P53783 Gm28205-201ENSMUST00000189177 697 ntBASIC13.29□□□□□ -0.28
Sox1P53783 Gm29032-201ENSMUST00000189797 697 ntBASIC13.29□□□□□ -0.28
Sox1P53783 Gm28695-201ENSMUST00000190300 697 ntBASIC13.29□□□□□ -0.28
Sox1P53783 Gm32999-201ENSMUST00000192693 562 ntBASIC13.29□□□□□ -0.28
Sox1P53783 Gm37448-201ENSMUST00000192795 697 ntBASIC13.29□□□□□ -0.28
Sox1P53783 A430050A11Rik-201ENSMUST00000195348 646 ntBASIC13.29□□□□□ -0.28
Sox1P53783 Gtf3c6-201ENSMUST00000019982 887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sox1P53783 Gm44552-201ENSMUST00000205458 1247 ntBASIC13.29□□□□□ -0.28
Sox1P53783 Gm21027-201ENSMUST00000219300 1236 ntBASIC13.29□□□□□ -0.28
Sox1P53783 Gm40709-203ENSMUST00000219695 973 ntTSL 5 BASIC13.29□□□□□ -0.28
Sox1P53783 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sox1P53783 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sox1P53783 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sox1P53783 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC13.29□□□□□ -0.28
Sox1P53783 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC13.29□□□□□ -0.28
Sox1P53783 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sox1P53783 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sox1P53783 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sox1P53783 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Sox1P53783 AC159308.2-201ENSMUST00000213592 2325 ntBASIC13.29□□□□□ -0.28
Sox1P53783 Rabggtb-202ENSMUST00000167111 1418 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Sox1P53783 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sox1P53783 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC13.29□□□□□ -0.28
Sox1P53783 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC13.29□□□□□ -0.28
Sox1P53783 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sox1P53783 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sox1P53783 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC13.29□□□□□ -0.28
Sox1P53783 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Sox1P53783 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sox1P53783 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Sox1P53783 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Sox1P53783 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sox1P53783 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC13.28□□□□□ -0.28
Sox1P53783 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sox1P53783 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sox1P53783 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sox1P53783 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sox1P53783 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sox1P53783 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Sox1P53783 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC13.28□□□□□ -0.28
Sox1P53783 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sox1P53783 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC13.28□□□□□ -0.28
Sox1P53783 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sox1P53783 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sox1P53783 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sox1P53783 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sox1P53783 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Sox1P53783 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Sox1P53783 Gm11892-201ENSMUST00000117711 1202 ntBASIC13.28□□□□□ -0.28
Sox1P53783 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Sox1P53783 Gm13073-201ENSMUST00000134059 486 ntTSL 3 BASIC13.28□□□□□ -0.28
Sox1P53783 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC13.28□□□□□ -0.28
Sox1P53783 Mir6998-201ENSMUST00000183343 64 ntBASIC13.28□□□□□ -0.28
Sox1P53783 Gm37246-201ENSMUST00000192665 835 ntBASIC13.28□□□□□ -0.28
Sox1P53783 Gm4797-201ENSMUST00000219075 1283 ntBASIC13.28□□□□□ -0.28
Sox1P53783 Gm18974-201ENSMUST00000221478 1031 ntBASIC13.28□□□□□ -0.28
Sox1P53783 Gm1821-202ENSMUST00000227415 750 ntBASIC13.28□□□□□ -0.28
Sox1P53783 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sox1P53783 1810009A15Rik-201ENSMUST00000096251 806 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sox1P53783 4930523C07Rik-202ENSMUST00000097513 300 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Sox1P53783 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC13.28□□□□□ -0.28
Sox1P53783 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC13.28□□□□□ -0.28
Sox1P53783 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sox1P53783 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 54 ms