Protein–RNA interactions for Protein: P48540

Gdnf, Glial cell line-derived neurotrophic factor, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GdnfP48540 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
GdnfP48540 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC11.48□□□□□ -0.57
GdnfP48540 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC11.48□□□□□ -0.57
GdnfP48540 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
GdnfP48540 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
GdnfP48540 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
GdnfP48540 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC11.48□□□□□ -0.57
GdnfP48540 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
GdnfP48540 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
GdnfP48540 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
GdnfP48540 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC11.48□□□□□ -0.57
GdnfP48540 Mir7684-201ENSMUST00000183858 60 ntBASIC11.48□□□□□ -0.57
GdnfP48540 Mir8102-201ENSMUST00000184148 139 ntBASIC11.48□□□□□ -0.57
GdnfP48540 Gm29667-201ENSMUST00000190817 490 ntBASIC11.48□□□□□ -0.57
GdnfP48540 Gm10766-202ENSMUST00000194123 606 ntBASIC11.48□□□□□ -0.57
GdnfP48540 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC11.48□□□□□ -0.57
GdnfP48540 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
GdnfP48540 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC11.48□□□□□ -0.57
GdnfP48540 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
GdnfP48540 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC11.48□□□□□ -0.57
GdnfP48540 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC11.48□□□□□ -0.57
GdnfP48540 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
GdnfP48540 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
GdnfP48540 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC11.48□□□□□ -0.57
GdnfP48540 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC11.48□□□□□ -0.57
GdnfP48540 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
GdnfP48540 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC11.48□□□□□ -0.57
GdnfP48540 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
GdnfP48540 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
GdnfP48540 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
GdnfP48540 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
GdnfP48540 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
GdnfP48540 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
GdnfP48540 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
GdnfP48540 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
GdnfP48540 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
GdnfP48540 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
GdnfP48540 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
GdnfP48540 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
GdnfP48540 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
GdnfP48540 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
GdnfP48540 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC11.47□□□□□ -0.57
GdnfP48540 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
GdnfP48540 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
GdnfP48540 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
GdnfP48540 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC11.47□□□□□ -0.57
GdnfP48540 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
GdnfP48540 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
GdnfP48540 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
GdnfP48540 Gm45053-201ENSMUST00000206112 2499 ntBASIC11.47□□□□□ -0.57
GdnfP48540 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
GdnfP48540 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
GdnfP48540 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
GdnfP48540 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
GdnfP48540 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC11.47□□□□□ -0.57
GdnfP48540 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
GdnfP48540 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
GdnfP48540 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
GdnfP48540 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
GdnfP48540 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC11.47□□□□□ -0.57
GdnfP48540 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
GdnfP48540 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
GdnfP48540 Mir874-201ENSMUST00000104769 76 ntBASIC11.47□□□□□ -0.57
GdnfP48540 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC11.47□□□□□ -0.57
GdnfP48540 Gm11557-201ENSMUST00000120200 1008 ntBASIC11.47□□□□□ -0.57
GdnfP48540 Gm14719-201ENSMUST00000121891 340 ntBASIC11.47□□□□□ -0.57
GdnfP48540 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC11.47□□□□□ -0.57
GdnfP48540 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
GdnfP48540 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC11.47□□□□□ -0.57
GdnfP48540 Gm8927-201ENSMUST00000181978 981 ntBASIC11.47□□□□□ -0.57
GdnfP48540 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
GdnfP48540 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC11.47□□□□□ -0.57
GdnfP48540 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC11.47□□□□□ -0.57
GdnfP48540 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC11.47□□□□□ -0.57
GdnfP48540 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
GdnfP48540 AC132863.2-201ENSMUST00000226643 799 ntBASIC11.47□□□□□ -0.57
GdnfP48540 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
GdnfP48540 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
GdnfP48540 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC11.47□□□□□ -0.57
GdnfP48540 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
GdnfP48540 Gm3222-201ENSMUST00000071282 990 ntBASIC11.47□□□□□ -0.57
GdnfP48540 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
GdnfP48540 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC11.47□□□□□ -0.57
GdnfP48540 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
GdnfP48540 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC11.47□□□□□ -0.57
GdnfP48540 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
GdnfP48540 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
GdnfP48540 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
GdnfP48540 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
GdnfP48540 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
GdnfP48540 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
GdnfP48540 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
GdnfP48540 Gm5989-201ENSMUST00000096092 2077 ntBASIC11.47□□□□□ -0.57
GdnfP48540 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
GdnfP48540 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC11.46□□□□□ -0.57
GdnfP48540 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
GdnfP48540 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
GdnfP48540 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
GdnfP48540 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
GdnfP48540 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms