Protein–RNA interactions for Protein: P43488

Tnfsf4, Tumor necrosis factor ligand superfamily member 4, mousemouse

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf4P43488 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Tnfsf4P43488 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Tnfsf4P43488 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Tnfsf4P43488 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Tnfsf4P43488 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Tnfsf4P43488 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Tnfsf4P43488 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Tnfsf4P43488 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Tnfsf4P43488 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Tnfsf4P43488 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC12.63□□□□□ -0.39
Tnfsf4P43488 Gm6447-201ENSMUST00000118905 835 ntBASIC12.63□□□□□ -0.39
Tnfsf4P43488 Gm12151-201ENSMUST00000121374 290 ntBASIC12.63□□□□□ -0.39
Tnfsf4P43488 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC12.63□□□□□ -0.39
Tnfsf4P43488 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Tnfsf4P43488 Gm28760-201ENSMUST00000185995 736 ntBASIC12.63□□□□□ -0.39
Tnfsf4P43488 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC12.63□□□□□ -0.39
Tnfsf4P43488 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC12.63□□□□□ -0.39
Tnfsf4P43488 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Tnfsf4P43488 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC12.63□□□□□ -0.39
Tnfsf4P43488 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Tnfsf4P43488 Hist1h2al-201ENSMUST00000091708 339 ntBASIC12.63□□□□□ -0.39
Tnfsf4P43488 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Tnfsf4P43488 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Tnfsf4P43488 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Tnfsf4P43488 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Tnfsf4P43488 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Tnfsf4P43488 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Tnfsf4P43488 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC12.63□□□□□ -0.39
Tnfsf4P43488 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Tnfsf4P43488 Gm45743-201ENSMUST00000212701 2795 ntBASIC12.63□□□□□ -0.39
Tnfsf4P43488 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Tnfsf4P43488 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Tnfsf4P43488 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Tnfsf4P43488 Gm43463-201ENSMUST00000195967 1803 ntBASIC12.62□□□□□ -0.39
Tnfsf4P43488 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Tnfsf4P43488 Gm3052-202ENSMUST00000188254 2224 ntBASIC12.62□□□□□ -0.39
Tnfsf4P43488 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Tnfsf4P43488 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Tnfsf4P43488 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Tnfsf4P43488 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Tnfsf4P43488 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Tnfsf4P43488 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Tnfsf4P43488 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Tnfsf4P43488 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Tnfsf4P43488 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
Tnfsf4P43488 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Tnfsf4P43488 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Tnfsf4P43488 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC12.62□□□□□ -0.39
Tnfsf4P43488 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Tnfsf4P43488 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC12.62□□□□□ -0.39
Tnfsf4P43488 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC12.62□□□□□ -0.39
Tnfsf4P43488 Gm24694-201ENSMUST00000180054 110 ntBASIC12.62□□□□□ -0.39
Tnfsf4P43488 Mir8102-201ENSMUST00000184148 139 ntBASIC12.62□□□□□ -0.39
Tnfsf4P43488 Gm27663-201ENSMUST00000184839 110 ntBASIC12.62□□□□□ -0.39
Tnfsf4P43488 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Tnfsf4P43488 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC12.62□□□□□ -0.39
Tnfsf4P43488 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Tnfsf4P43488 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Tnfsf4P43488 AC132863.2-201ENSMUST00000226643 799 ntBASIC12.62□□□□□ -0.39
Tnfsf4P43488 AC154276.1-201ENSMUST00000228874 1299 ntBASIC12.62□□□□□ -0.39
Tnfsf4P43488 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Tnfsf4P43488 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Tnfsf4P43488 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Tnfsf4P43488 Rn7sk-201ENSMUST00000083103 331 ntBASIC12.62□□□□□ -0.39
Tnfsf4P43488 Gm26315-201ENSMUST00000083890 321 ntBASIC12.62□□□□□ -0.39
Tnfsf4P43488 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Tnfsf4P43488 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Tnfsf4P43488 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Tnfsf4P43488 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Tnfsf4P43488 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Tnfsf4P43488 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Tnfsf4P43488 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Tnfsf4P43488 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Tnfsf4P43488 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Tnfsf4P43488 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC12.61□□□□□ -0.39
Tnfsf4P43488 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC12.61□□□□□ -0.39
Tnfsf4P43488 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Tnfsf4P43488 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Tnfsf4P43488 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Tnfsf4P43488 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Tnfsf4P43488 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC12.61□□□□□ -0.39
Tnfsf4P43488 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC12.61□□□□□ -0.39
Tnfsf4P43488 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Tnfsf4P43488 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Tnfsf4P43488 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Tnfsf4P43488 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Tnfsf4P43488 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC12.61□□□□□ -0.39
Tnfsf4P43488 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Tnfsf4P43488 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Tnfsf4P43488 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Tnfsf4P43488 Gm14719-201ENSMUST00000121891 340 ntBASIC12.61□□□□□ -0.39
Tnfsf4P43488 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC12.61□□□□□ -0.39
Tnfsf4P43488 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC12.61□□□□□ -0.39
Tnfsf4P43488 Gm44985-201ENSMUST00000206202 1016 ntBASIC12.61□□□□□ -0.39
Tnfsf4P43488 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC12.61□□□□□ -0.39
Tnfsf4P43488 AC192088.1-201ENSMUST00000227561 301 ntBASIC12.61□□□□□ -0.39
Tnfsf4P43488 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Tnfsf4P43488 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Tnfsf4P43488 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC12.61□□□□□ -0.39
Tnfsf4P43488 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms