Protein–RNA interactions for Protein: P42581

Hmx3, Homeobox protein HMX3, mousemouse

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmx3P42581 Gm44608-201ENSMUST00000206827 855 ntBASIC10.97□□□□□ -0.65
Hmx3P42581 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC10.97□□□□□ -0.65
Hmx3P42581 AC090659.2-201ENSMUST00000225378 1186 ntBASIC10.97□□□□□ -0.65
Hmx3P42581 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Hmx3P42581 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Hmx3P42581 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Hmx3P42581 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Hmx3P42581 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Hmx3P42581 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Hmx3P42581 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Hmx3P42581 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC10.97□□□□□ -0.65
Hmx3P42581 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC10.97□□□□□ -0.65
Hmx3P42581 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Hmx3P42581 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Hmx3P42581 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Hmx3P42581 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Hmx3P42581 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Hmx3P42581 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Hmx3P42581 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Hmx3P42581 Gm18983-201ENSMUST00000222884 2729 ntBASIC10.97□□□□□ -0.65
Hmx3P42581 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC10.97□□□□□ -0.65
Hmx3P42581 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Hmx3P42581 Spop-201ENSMUST00000107722 3063 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Hmx3P42581 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Hmx3P42581 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Hmx3P42581 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Hmx3P42581 1700019D03Rik-202ENSMUST00000114492 3565 ntAPPRIS P1 TSL 3 BASIC10.97□□□□□ -0.65
Hmx3P42581 Bmp5-201ENSMUST00000012281 3822 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Hmx3P42581 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Hmx3P42581 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Hmx3P42581 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC10.97□□□□□ -0.65
Hmx3P42581 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Hmx3P42581 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Hmx3P42581 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
Hmx3P42581 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Hmx3P42581 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
Hmx3P42581 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Hmx3P42581 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Hmx3P42581 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Hmx3P42581 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Hmx3P42581 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Hmx3P42581 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Hmx3P42581 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
Hmx3P42581 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
Hmx3P42581 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Hmx3P42581 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Hmx3P42581 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Hmx3P42581 Sass6-204ENSMUST00000197335 2458 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Hmx3P42581 Gm15889-202ENSMUST00000212669 2443 ntBASIC10.96□□□□□ -0.65
Hmx3P42581 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
Hmx3P42581 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC10.96□□□□□ -0.65
Hmx3P42581 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
Hmx3P42581 Gm37849-201ENSMUST00000194722 1881 ntBASIC10.96□□□□□ -0.65
Hmx3P42581 Adam12-201ENSMUST00000067680 7675 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Hmx3P42581 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Hmx3P42581 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Hmx3P42581 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Hmx3P42581 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC10.96□□□□□ -0.65
Hmx3P42581 Gm8410-201ENSMUST00000117225 605 ntBASIC10.96□□□□□ -0.65
Hmx3P42581 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC10.96□□□□□ -0.65
Hmx3P42581 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC10.96□□□□□ -0.65
Hmx3P42581 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Hmx3P42581 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Hmx3P42581 Gm43575-201ENSMUST00000196420 516 ntBASIC10.96□□□□□ -0.65
Hmx3P42581 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Hmx3P42581 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Hmx3P42581 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Hmx3P42581 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
Hmx3P42581 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
Hmx3P42581 Anp32e-202ENSMUST00000165307 3274 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.66
Hmx3P42581 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Hmx3P42581 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.66
Hmx3P42581 Gm37542-201ENSMUST00000192563 2832 ntBASIC10.96□□□□□ -0.66
Hmx3P42581 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC10.96□□□□□ -0.66
Hmx3P42581 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC10.96□□□□□ -0.66
Hmx3P42581 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.66
Hmx3P42581 Gm1995-201ENSMUST00000220838 2602 ntBASIC10.96□□□□□ -0.66
Hmx3P42581 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Hmx3P42581 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC10.96□□□□□ -0.66
Hmx3P42581 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Hmx3P42581 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Hmx3P42581 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC10.96□□□□□ -0.66
Hmx3P42581 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Hmx3P42581 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.66
Hmx3P42581 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Hmx3P42581 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Hmx3P42581 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC10.96□□□□□ -0.66
Hmx3P42581 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Hmx3P42581 Tns1-209ENSMUST00000187691 2813 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Hmx3P42581 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Hmx3P42581 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Hmx3P42581 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Hmx3P42581 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Hmx3P42581 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC10.95□□□□□ -0.66
Hmx3P42581 Ngfr-201ENSMUST00000000122 3446 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Hmx3P42581 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Hmx3P42581 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Hmx3P42581 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC10.95□□□□□ -0.66
Hmx3P42581 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Hmx3P42581 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms