Protein–RNA interactions for Protein: P39749

Fen1, Flap endonuclease 1, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fen1P39749 Gm28630-201ENSMUST00000187806 498 ntBASIC13.18□□□□□ -0.3
Fen1P39749 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Fen1P39749 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Fen1P39749 AC164702.1-201ENSMUST00000220135 2212 ntBASIC13.18□□□□□ -0.3
Fen1P39749 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Fen1P39749 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Fen1P39749 Gm13859-201ENSMUST00000119936 1423 ntBASIC13.18□□□□□ -0.3
Fen1P39749 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Fen1P39749 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
Fen1P39749 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Fen1P39749 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Fen1P39749 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC13.18□□□□□ -0.3
Fen1P39749 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Fen1P39749 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Fen1P39749 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Fen1P39749 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Fen1P39749 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Fen1P39749 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Fen1P39749 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Fen1P39749 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Fen1P39749 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Fen1P39749 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Fen1P39749 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Fen1P39749 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Fen1P39749 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Fen1P39749 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Fen1P39749 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Fen1P39749 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Fen1P39749 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Fen1P39749 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Fen1P39749 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Fen1P39749 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Fen1P39749 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Fen1P39749 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Fen1P39749 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC13.17□□□□□ -0.3
Fen1P39749 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Fen1P39749 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Fen1P39749 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Fen1P39749 Gm24420-201ENSMUST00000176676 59 ntBASIC13.17□□□□□ -0.3
Fen1P39749 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Fen1P39749 Gm27321-201ENSMUST00000185021 205 ntBASIC13.17□□□□□ -0.3
Fen1P39749 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Fen1P39749 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
Fen1P39749 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Fen1P39749 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Fen1P39749 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Fen1P39749 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Fen1P39749 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Fen1P39749 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Fen1P39749 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Fen1P39749 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Fen1P39749 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Fen1P39749 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Fen1P39749 Gm28323-201ENSMUST00000186817 2499 ntBASIC13.17□□□□□ -0.3
Fen1P39749 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Fen1P39749 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
Fen1P39749 Gm44851-201ENSMUST00000205735 2309 ntBASIC13.17□□□□□ -0.3
Fen1P39749 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Fen1P39749 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Fen1P39749 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Fen1P39749 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Fen1P39749 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Fen1P39749 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Fen1P39749 AC151895.1-201ENSMUST00000219025 1742 ntBASIC13.16□□□□□ -0.3
Fen1P39749 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC13.16□□□□□ -0.3
Fen1P39749 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Fen1P39749 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Fen1P39749 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Fen1P39749 Gm10728-201ENSMUST00000194292 1829 ntBASIC13.16□□□□□ -0.3
Fen1P39749 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Fen1P39749 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Fen1P39749 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC13.16□□□□□ -0.3
Fen1P39749 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC13.16□□□□□ -0.3
Fen1P39749 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Fen1P39749 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC13.16□□□□□ -0.3
Fen1P39749 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Fen1P39749 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Fen1P39749 Gm43417-201ENSMUST00000201586 5207 ntBASIC13.16□□□□□ -0.3
Fen1P39749 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Fen1P39749 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Fen1P39749 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Fen1P39749 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Fen1P39749 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC13.15□□□□□ -0.3
Fen1P39749 AC159621.2-201ENSMUST00000223519 1326 ntBASIC13.15□□□□□ -0.3
Fen1P39749 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Fen1P39749 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Fen1P39749 AC168058.1-201ENSMUST00000219521 2282 ntBASIC13.15□□□□□ -0.3
Fen1P39749 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Fen1P39749 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Fen1P39749 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Fen1P39749 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Fen1P39749 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.3
Fen1P39749 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Fen1P39749 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Fen1P39749 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Fen1P39749 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Fen1P39749 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Fen1P39749 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC13.15□□□□□ -0.3
Fen1P39749 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Fen1P39749 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 94.1 ms