Protein–RNA interactions for Protein: P39038

Cdh4, Cadherin-4, mousemouse

Predictions only

Length 913 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh4P39038 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cdh4P39038 Zscan30-202ENSMUST00000224144 1458 ntBASIC12.53□□□□□ -0.4
Cdh4P39038 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cdh4P39038 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Cdh4P39038 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cdh4P39038 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cdh4P39038 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cdh4P39038 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cdh4P39038 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cdh4P39038 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cdh4P39038 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC12.53□□□□□ -0.4
Cdh4P39038 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Cdh4P39038 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cdh4P39038 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cdh4P39038 Gm12390-201ENSMUST00000117897 397 ntBASIC12.53□□□□□ -0.4
Cdh4P39038 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC12.53□□□□□ -0.4
Cdh4P39038 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC12.53□□□□□ -0.4
Cdh4P39038 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC12.53□□□□□ -0.4
Cdh4P39038 Gm38230-201ENSMUST00000193572 1159 ntBASIC12.53□□□□□ -0.4
Cdh4P39038 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC12.53□□□□□ -0.4
Cdh4P39038 Gm6266-201ENSMUST00000203844 806 ntBASIC12.53□□□□□ -0.4
Cdh4P39038 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC12.53□□□□□ -0.4
Cdh4P39038 AC122305.4-201ENSMUST00000216159 1206 ntBASIC12.53□□□□□ -0.4
Cdh4P39038 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cdh4P39038 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cdh4P39038 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cdh4P39038 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cdh4P39038 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cdh4P39038 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cdh4P39038 AC114008.2-201ENSMUST00000227699 1347 ntBASIC12.53□□□□□ -0.4
Cdh4P39038 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cdh4P39038 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cdh4P39038 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cdh4P39038 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cdh4P39038 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Cdh4P39038 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cdh4P39038 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cdh4P39038 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC12.53□□□□□ -0.4
Cdh4P39038 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Cdh4P39038 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cdh4P39038 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cdh4P39038 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cdh4P39038 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cdh4P39038 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cdh4P39038 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Cdh4P39038 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cdh4P39038 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cdh4P39038 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cdh4P39038 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cdh4P39038 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Cdh4P39038 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cdh4P39038 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cdh4P39038 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Cdh4P39038 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cdh4P39038 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cdh4P39038 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cdh4P39038 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cdh4P39038 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cdh4P39038 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cdh4P39038 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cdh4P39038 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC12.52□□□□□ -0.4
Cdh4P39038 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cdh4P39038 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Cdh4P39038 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Cdh4P39038 Gm12203-201ENSMUST00000118235 598 ntBASIC12.52□□□□□ -0.41
Cdh4P39038 Gm13829-201ENSMUST00000119600 138 ntBASIC12.52□□□□□ -0.41
Cdh4P39038 Gm12209-201ENSMUST00000120089 596 ntBASIC12.52□□□□□ -0.41
Cdh4P39038 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cdh4P39038 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Cdh4P39038 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC12.52□□□□□ -0.41
Cdh4P39038 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC12.52□□□□□ -0.41
Cdh4P39038 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
Cdh4P39038 Gm37922-201ENSMUST00000195596 455 ntBASIC12.52□□□□□ -0.41
Cdh4P39038 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC12.52□□□□□ -0.41
Cdh4P39038 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC12.52□□□□□ -0.41
Cdh4P39038 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Cdh4P39038 AC155237.1-201ENSMUST00000226196 1279 ntBASIC12.52□□□□□ -0.41
Cdh4P39038 AC154276.1-201ENSMUST00000228874 1299 ntBASIC12.52□□□□□ -0.41
Cdh4P39038 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cdh4P39038 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cdh4P39038 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cdh4P39038 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cdh4P39038 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cdh4P39038 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cdh4P39038 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cdh4P39038 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cdh4P39038 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cdh4P39038 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC12.52□□□□□ -0.41
Cdh4P39038 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Cdh4P39038 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
Cdh4P39038 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cdh4P39038 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Cdh4P39038 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC12.52□□□□□ -0.41
Cdh4P39038 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.41
Cdh4P39038 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Cdh4P39038 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cdh4P39038 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Cdh4P39038 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC12.52□□□□□ -0.41
Cdh4P39038 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cdh4P39038 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms