Protein–RNA interactions for Protein: P35582

Foxa1, Hepatocyte nuclear factor 3-alpha, mousemouse

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxa1P35582 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Foxa1P35582 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Foxa1P35582 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Foxa1P35582 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Foxa1P35582 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Foxa1P35582 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Foxa1P35582 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Foxa1P35582 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Foxa1P35582 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Foxa1P35582 Gm45684-201ENSMUST00000210244 1571 ntBASIC12.09□□□□□ -0.47
Foxa1P35582 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Foxa1P35582 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Foxa1P35582 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Foxa1P35582 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Foxa1P35582 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Foxa1P35582 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Foxa1P35582 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Foxa1P35582 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Foxa1P35582 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Foxa1P35582 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC12.09□□□□□ -0.47
Foxa1P35582 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Foxa1P35582 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Foxa1P35582 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Foxa1P35582 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Foxa1P35582 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Foxa1P35582 Gm8805-201ENSMUST00000117848 313 ntBASIC12.09□□□□□ -0.47
Foxa1P35582 Gm24644-201ENSMUST00000157114 139 ntBASIC12.09□□□□□ -0.47
Foxa1P35582 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Foxa1P35582 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Foxa1P35582 Gm37019-201ENSMUST00000192133 2134 ntBASIC12.09□□□□□ -0.47
Foxa1P35582 AC134254.1-201ENSMUST00000221362 167 ntBASIC12.09□□□□□ -0.47
Foxa1P35582 AC130829.1-201ENSMUST00000221548 494 ntBASIC12.09□□□□□ -0.47
Foxa1P35582 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Foxa1P35582 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC12.09□□□□□ -0.47
Foxa1P35582 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Foxa1P35582 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Foxa1P35582 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Foxa1P35582 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Foxa1P35582 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Foxa1P35582 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Foxa1P35582 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Foxa1P35582 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Foxa1P35582 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Foxa1P35582 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Foxa1P35582 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Foxa1P35582 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Foxa1P35582 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC12.09□□□□□ -0.47
Foxa1P35582 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Foxa1P35582 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Foxa1P35582 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Foxa1P35582 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Foxa1P35582 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Foxa1P35582 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
Foxa1P35582 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC12.08□□□□□ -0.47
Foxa1P35582 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Foxa1P35582 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Foxa1P35582 Gm38049-201ENSMUST00000195698 1372 ntBASIC12.08□□□□□ -0.48
Foxa1P35582 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Foxa1P35582 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Foxa1P35582 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC12.08□□□□□ -0.48
Foxa1P35582 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC12.08□□□□□ -0.48
Foxa1P35582 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Foxa1P35582 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Foxa1P35582 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Foxa1P35582 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
Foxa1P35582 Gm4984-201ENSMUST00000115987 360 ntBASIC12.08□□□□□ -0.48
Foxa1P35582 Gm12539-201ENSMUST00000121549 1098 ntBASIC12.08□□□□□ -0.48
Foxa1P35582 Gm28693-202ENSMUST00000190758 331 ntBASIC12.08□□□□□ -0.48
Foxa1P35582 Gm38297-201ENSMUST00000195122 1057 ntBASIC12.08□□□□□ -0.48
Foxa1P35582 Gm42442-201ENSMUST00000197951 1133 ntBASIC12.08□□□□□ -0.48
Foxa1P35582 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Foxa1P35582 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Foxa1P35582 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC12.08□□□□□ -0.48
Foxa1P35582 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Foxa1P35582 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Foxa1P35582 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC12.08□□□□□ -0.48
Foxa1P35582 Gm9025-201ENSMUST00000122415 1575 ntBASIC12.08□□□□□ -0.48
Foxa1P35582 AC113060.1-201ENSMUST00000225689 1573 ntBASIC12.08□□□□□ -0.48
Foxa1P35582 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Foxa1P35582 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Foxa1P35582 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Foxa1P35582 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Foxa1P35582 Gm43364-201ENSMUST00000196046 3274 ntBASIC12.08□□□□□ -0.48
Foxa1P35582 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Foxa1P35582 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Foxa1P35582 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Foxa1P35582 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Foxa1P35582 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Foxa1P35582 Zscan30-202ENSMUST00000224144 1458 ntBASIC12.08□□□□□ -0.48
Foxa1P35582 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Foxa1P35582 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC12.07□□□□□ -0.48
Foxa1P35582 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Foxa1P35582 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC12.07□□□□□ -0.48
Foxa1P35582 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC12.07□□□□□ -0.48
Foxa1P35582 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Foxa1P35582 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Foxa1P35582 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Foxa1P35582 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Foxa1P35582 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Foxa1P35582 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms