Protein–RNA interactions for Protein: P0CG49

Ubb, Polyubiquitin-B, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UbbP0CG49 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
UbbP0CG49 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
UbbP0CG49 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
UbbP0CG49 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
UbbP0CG49 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
UbbP0CG49 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
UbbP0CG49 Gm24447-201ENSMUST00000083977 338 ntBASIC11.39□□□□□ -0.59
UbbP0CG49 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
UbbP0CG49 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
UbbP0CG49 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
UbbP0CG49 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
UbbP0CG49 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
UbbP0CG49 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
UbbP0CG49 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
UbbP0CG49 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
UbbP0CG49 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
UbbP0CG49 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC11.39□□□□□ -0.59
UbbP0CG49 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
UbbP0CG49 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
UbbP0CG49 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
UbbP0CG49 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
UbbP0CG49 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
UbbP0CG49 CT573086.2-201ENSMUST00000227277 4992 ntBASIC11.39□□□□□ -0.59
UbbP0CG49 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
UbbP0CG49 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC11.39□□□□□ -0.59
UbbP0CG49 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
UbbP0CG49 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
UbbP0CG49 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
UbbP0CG49 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
UbbP0CG49 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
UbbP0CG49 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
UbbP0CG49 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
UbbP0CG49 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
UbbP0CG49 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
UbbP0CG49 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
UbbP0CG49 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
UbbP0CG49 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
UbbP0CG49 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
UbbP0CG49 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
UbbP0CG49 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
UbbP0CG49 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
UbbP0CG49 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC11.38□□□□□ -0.59
UbbP0CG49 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC11.38□□□□□ -0.59
UbbP0CG49 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC11.38□□□□□ -0.59
UbbP0CG49 Gm25948-201ENSMUST00000175334 112 ntBASIC11.38□□□□□ -0.59
UbbP0CG49 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
UbbP0CG49 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
UbbP0CG49 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
UbbP0CG49 Gm8396-201ENSMUST00000057361 823 ntBASIC11.38□□□□□ -0.59
UbbP0CG49 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC11.38□□□□□ -0.59
UbbP0CG49 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
UbbP0CG49 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
UbbP0CG49 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
UbbP0CG49 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
UbbP0CG49 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
UbbP0CG49 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
UbbP0CG49 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
UbbP0CG49 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC11.38□□□□□ -0.59
UbbP0CG49 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
UbbP0CG49 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
UbbP0CG49 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
UbbP0CG49 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
UbbP0CG49 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
UbbP0CG49 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
UbbP0CG49 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
UbbP0CG49 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
UbbP0CG49 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
UbbP0CG49 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC11.38□□□□□ -0.59
UbbP0CG49 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
UbbP0CG49 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
UbbP0CG49 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
UbbP0CG49 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
UbbP0CG49 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
UbbP0CG49 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC11.37□□□□□ -0.59
UbbP0CG49 AC154767.3-201ENSMUST00000225150 1342 ntBASIC11.37□□□□□ -0.59
UbbP0CG49 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
UbbP0CG49 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC11.37□□□□□ -0.59
UbbP0CG49 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
UbbP0CG49 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
UbbP0CG49 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
UbbP0CG49 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC11.37□□□□□ -0.59
UbbP0CG49 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
UbbP0CG49 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
UbbP0CG49 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
UbbP0CG49 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC11.37□□□□□ -0.59
UbbP0CG49 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
UbbP0CG49 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
UbbP0CG49 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
UbbP0CG49 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC11.37□□□□□ -0.59
UbbP0CG49 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
UbbP0CG49 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC11.37□□□□□ -0.59
UbbP0CG49 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC11.37□□□□□ -0.59
UbbP0CG49 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC11.37□□□□□ -0.59
UbbP0CG49 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC11.37□□□□□ -0.59
UbbP0CG49 AC151286.1-201ENSMUST00000198489 145 ntBASIC11.37□□□□□ -0.59
UbbP0CG49 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC11.37□□□□□ -0.59
UbbP0CG49 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
UbbP0CG49 Gm17795-201ENSMUST00000214505 757 ntBASIC11.37□□□□□ -0.59
UbbP0CG49 Gm17870-201ENSMUST00000219489 1174 ntBASIC11.37□□□□□ -0.59
UbbP0CG49 AC124732.2-201ENSMUST00000221977 316 ntBASIC11.37□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms