Protein–RNA interactions for Protein: P03980

Ig heavy chain V region TEPC 1017, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P03980 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
P03980 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC10.1□□□□□ -0.79
P03980 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC10.1□□□□□ -0.79
P03980 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC10.1□□□□□ -0.79
P03980 Gm44344-201ENSMUST00000200287 129 ntBASIC10.1□□□□□ -0.79
P03980 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
P03980 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC10.1□□□□□ -0.79
P03980 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
P03980 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
P03980 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
P03980 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
P03980 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC10.1□□□□□ -0.79
P03980 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC10.1□□□□□ -0.79
P03980 Gm38037-201ENSMUST00000192600 1624 ntBASIC10.1□□□□□ -0.79
P03980 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC10.1□□□□□ -0.79
P03980 Gm44292-201ENSMUST00000205194 2364 ntBASIC10.1□□□□□ -0.79
P03980 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
P03980 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
P03980 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC10.1□□□□□ -0.79
P03980 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
P03980 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
P03980 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
P03980 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
P03980 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
P03980 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
P03980 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
P03980 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
P03980 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC10.09□□□□□ -0.79
P03980 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
P03980 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
P03980 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC10.09□□□□□ -0.79
P03980 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC10.09□□□□□ -0.79
P03980 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
P03980 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC10.09□□□□□ -0.79
P03980 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
P03980 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC10.09□□□□□ -0.79
P03980 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
P03980 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC10.09□□□□□ -0.79
P03980 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC10.09□□□□□ -0.79
P03980 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
P03980 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC10.09□□□□□ -0.79
P03980 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
P03980 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC10.09□□□□□ -0.79
P03980 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
P03980 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
P03980 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC10.09□□□□□ -0.79
P03980 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC10.09□□□□□ -0.79
P03980 Gm24447-201ENSMUST00000083977 338 ntBASIC10.09□□□□□ -0.79
P03980 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
P03980 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
P03980 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC10.09□□□□□ -0.79
P03980 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
P03980 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
P03980 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
P03980 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
P03980 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC10.09□□□□□ -0.79
P03980 Gm18263-201ENSMUST00000220846 1928 ntBASIC10.09□□□□□ -0.79
P03980 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
P03980 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC10.09□□□□□ -0.79
P03980 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC10.09□□□□□ -0.79
P03980 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
P03980 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
P03980 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
P03980 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
P03980 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
P03980 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
P03980 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
P03980 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
P03980 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC10.08□□□□□ -0.8
P03980 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
P03980 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
P03980 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
P03980 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
P03980 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
P03980 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
P03980 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC10.08□□□□□ -0.8
P03980 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
P03980 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
P03980 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
P03980 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC10.08□□□□□ -0.8
P03980 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
P03980 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
P03980 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
P03980 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC10.08□□□□□ -0.8
P03980 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
P03980 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
P03980 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC10.08□□□□□ -0.8
P03980 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC10.08□□□□□ -0.8
P03980 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC10.08□□□□□ -0.8
P03980 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC10.08□□□□□ -0.8
P03980 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
P03980 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
P03980 Gm5312-201ENSMUST00000203728 547 ntBASIC10.08□□□□□ -0.8
P03980 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
P03980 Gm17795-201ENSMUST00000214505 757 ntBASIC10.08□□□□□ -0.8
P03980 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC10.08□□□□□ -0.8
P03980 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
P03980 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
P03980 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
P03980 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 69.7 ms