Protein–RNA interactions for Protein: O88508

Dnmt3a, DNA (cytosine-5)-methyltransferase 3A, mousemouse

Known RBP Predictions only

Length 908 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dnmt3aO88508 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC13.19□□□□□ -0.3
Dnmt3aO88508 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Dnmt3aO88508 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Dnmt3aO88508 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC13.19□□□□□ -0.3
Dnmt3aO88508 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Dnmt3aO88508 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Dnmt3aO88508 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Dnmt3aO88508 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Dnmt3aO88508 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Dnmt3aO88508 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Dnmt3aO88508 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Dnmt3aO88508 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Dnmt3aO88508 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Dnmt3aO88508 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Dnmt3aO88508 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Dnmt3aO88508 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Dnmt3aO88508 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Dnmt3aO88508 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Dnmt3aO88508 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Dnmt3aO88508 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Dnmt3aO88508 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Dnmt3aO88508 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Dnmt3aO88508 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC13.18□□□□□ -0.3
Dnmt3aO88508 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Dnmt3aO88508 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC13.18□□□□□ -0.3
Dnmt3aO88508 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Dnmt3aO88508 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Dnmt3aO88508 Gm5303-201ENSMUST00000117943 1252 ntBASIC13.18□□□□□ -0.3
Dnmt3aO88508 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Dnmt3aO88508 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Dnmt3aO88508 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC13.18□□□□□ -0.3
Dnmt3aO88508 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Dnmt3aO88508 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC13.18□□□□□ -0.3
Dnmt3aO88508 Gm27486-201ENSMUST00000184923 80 ntBASIC13.18□□□□□ -0.3
Dnmt3aO88508 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC13.18□□□□□ -0.3
Dnmt3aO88508 Gm37102-201ENSMUST00000195740 1105 ntBASIC13.18□□□□□ -0.3
Dnmt3aO88508 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Dnmt3aO88508 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
Dnmt3aO88508 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Dnmt3aO88508 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Dnmt3aO88508 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Dnmt3aO88508 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Dnmt3aO88508 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC13.18□□□□□ -0.3
Dnmt3aO88508 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Dnmt3aO88508 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Dnmt3aO88508 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Dnmt3aO88508 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC13.18□□□□□ -0.3
Dnmt3aO88508 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Dnmt3aO88508 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Dnmt3aO88508 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC13.18□□□□□ -0.3
Dnmt3aO88508 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Dnmt3aO88508 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Dnmt3aO88508 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Dnmt3aO88508 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC13.18□□□□□ -0.3
Dnmt3aO88508 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Dnmt3aO88508 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Dnmt3aO88508 Abhd6-203ENSMUST00000225234 1958 ntBASIC13.18□□□□□ -0.3
Dnmt3aO88508 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Dnmt3aO88508 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Dnmt3aO88508 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Dnmt3aO88508 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Dnmt3aO88508 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC13.17□□□□□ -0.3
Dnmt3aO88508 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Dnmt3aO88508 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Dnmt3aO88508 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Dnmt3aO88508 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Dnmt3aO88508 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Dnmt3aO88508 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC13.17□□□□□ -0.3
Dnmt3aO88508 AC096628.2-201ENSMUST00000225443 1413 ntBASIC13.17□□□□□ -0.3
Dnmt3aO88508 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Dnmt3aO88508 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Dnmt3aO88508 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Dnmt3aO88508 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC13.17□□□□□ -0.3
Dnmt3aO88508 Mup-ps23-201ENSMUST00000118063 630 ntBASIC13.17□□□□□ -0.3
Dnmt3aO88508 Gm6447-201ENSMUST00000118905 835 ntBASIC13.17□□□□□ -0.3
Dnmt3aO88508 Gm11814-201ENSMUST00000119515 929 ntBASIC13.17□□□□□ -0.3
Dnmt3aO88508 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC13.17□□□□□ -0.3
Dnmt3aO88508 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Dnmt3aO88508 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Dnmt3aO88508 Gm27839-201ENSMUST00000184242 106 ntBASIC13.17□□□□□ -0.3
Dnmt3aO88508 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Dnmt3aO88508 Gm44044-201ENSMUST00000205178 1089 ntBASIC13.17□□□□□ -0.3
Dnmt3aO88508 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC13.17□□□□□ -0.3
Dnmt3aO88508 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC13.17□□□□□ -0.3
Dnmt3aO88508 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
Dnmt3aO88508 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Dnmt3aO88508 Ssr1-203ENSMUST00000225246 1825 ntBASIC13.17□□□□□ -0.3
Dnmt3aO88508 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC13.17□□□□□ -0.3
Dnmt3aO88508 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Dnmt3aO88508 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Dnmt3aO88508 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Dnmt3aO88508 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Dnmt3aO88508 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Dnmt3aO88508 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Dnmt3aO88508 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Dnmt3aO88508 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Dnmt3aO88508 Gm26616-202ENSMUST00000195676 3107 ntBASIC13.17□□□□□ -0.3
Dnmt3aO88508 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Dnmt3aO88508 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Dnmt3aO88508 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms