Protein–RNA interactions for Protein: O15344

MID1, E3 ubiquitin-protein ligase Midline-1, humanhuman

Predictions only

Length 667 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MID1O15344 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
MID1O15344 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
MID1O15344 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC16.09■□□□□ 0.17
MID1O15344 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
MID1O15344 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
MID1O15344 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
MID1O15344 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
MID1O15344 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
MID1O15344 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC16.09■□□□□ 0.17
MID1O15344 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
MID1O15344 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC16.09■□□□□ 0.17
MID1O15344 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
MID1O15344 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
MID1O15344 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
MID1O15344 AZGP1P1-201ENST00000411909 902 ntBASIC16.09■□□□□ 0.17
MID1O15344 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC16.09■□□□□ 0.17
MID1O15344 AP006294.1-201ENST00000415407 339 ntBASIC16.09■□□□□ 0.17
MID1O15344 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC16.09■□□□□ 0.17
MID1O15344 TIMM17BP1-201ENST00000545713 516 ntBASIC16.09■□□□□ 0.17
MID1O15344 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC16.09■□□□□ 0.17
MID1O15344 AC092337.1-201ENST00000568699 1129 ntBASIC16.09■□□□□ 0.17
MID1O15344 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC16.09■□□□□ 0.17
MID1O15344 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC16.09■□□□□ 0.17
MID1O15344 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC16.09■□□□□ 0.17
MID1O15344 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC16.09■□□□□ 0.17
MID1O15344 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC16.09■□□□□ 0.17
MID1O15344 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC16.09■□□□□ 0.17
MID1O15344 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
MID1O15344 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
MID1O15344 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
MID1O15344 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
MID1O15344 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC16.09■□□□□ 0.17
MID1O15344 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC16.09■□□□□ 0.17
MID1O15344 F11R-206ENST00000621309 4770 ntTSL 5 BASIC16.09■□□□□ 0.17
MID1O15344 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
MID1O15344 KRT8P37-201ENST00000451609 1420 ntBASIC16.09■□□□□ 0.17
MID1O15344 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC16.09■□□□□ 0.17
MID1O15344 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC16.09■□□□□ 0.17
MID1O15344 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC16.09■□□□□ 0.17
MID1O15344 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC16.09■□□□□ 0.17
MID1O15344 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
MID1O15344 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
MID1O15344 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC16.09■□□□□ 0.17
MID1O15344 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
MID1O15344 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
MID1O15344 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.17
MID1O15344 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
MID1O15344 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
MID1O15344 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
MID1O15344 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
MID1O15344 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
MID1O15344 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC16.08■□□□□ 0.17
MID1O15344 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.17
MID1O15344 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
MID1O15344 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC16.08■□□□□ 0.16
MID1O15344 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
MID1O15344 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
MID1O15344 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
MID1O15344 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
MID1O15344 MEP1AP4-201ENST00000423244 1087 ntBASIC16.08■□□□□ 0.16
MID1O15344 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
MID1O15344 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC16.08■□□□□ 0.16
MID1O15344 NAA50-208ENST00000497255 789 ntTSL 5 BASIC16.08■□□□□ 0.16
MID1O15344 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC16.08■□□□□ 0.16
MID1O15344 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
MID1O15344 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC16.08■□□□□ 0.16
MID1O15344 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC16.08■□□□□ 0.16
MID1O15344 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC16.08■□□□□ 0.16
MID1O15344 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
MID1O15344 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC16.08■□□□□ 0.16
MID1O15344 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC16.08■□□□□ 0.16
MID1O15344 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC16.08■□□□□ 0.16
MID1O15344 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
MID1O15344 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
MID1O15344 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC16.08■□□□□ 0.16
MID1O15344 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
MID1O15344 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
MID1O15344 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
MID1O15344 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
MID1O15344 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC16.08■□□□□ 0.16
MID1O15344 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
MID1O15344 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
MID1O15344 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
MID1O15344 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
MID1O15344 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
MID1O15344 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC16.07■□□□□ 0.16
MID1O15344 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
MID1O15344 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC16.07■□□□□ 0.16
MID1O15344 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC16.07■□□□□ 0.16
MID1O15344 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
MID1O15344 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
MID1O15344 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
MID1O15344 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
MID1O15344 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
MID1O15344 AC084018.2-201ENST00000613093 2607 ntBASIC16.07■□□□□ 0.16
MID1O15344 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
MID1O15344 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC16.07■□□□□ 0.16
MID1O15344 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
MID1O15344 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
MID1O15344 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms