Protein–RNA interactions for Protein: O09039

Sh2b3, SH2B adapter protein 3, mousemouse

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2b3O09039 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Sh2b3O09039 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Sh2b3O09039 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Sh2b3O09039 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Sh2b3O09039 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Sh2b3O09039 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC11.65□□□□□ -0.54
Sh2b3O09039 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC11.65□□□□□ -0.54
Sh2b3O09039 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC11.65□□□□□ -0.54
Sh2b3O09039 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC11.65□□□□□ -0.54
Sh2b3O09039 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC11.65□□□□□ -0.54
Sh2b3O09039 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Sh2b3O09039 Gm8810-201ENSMUST00000172895 754 ntBASIC11.65□□□□□ -0.54
Sh2b3O09039 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Sh2b3O09039 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Sh2b3O09039 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC11.65□□□□□ -0.54
Sh2b3O09039 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC11.65□□□□□ -0.54
Sh2b3O09039 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC11.65□□□□□ -0.54
Sh2b3O09039 Gm17330-201ENSMUST00000221047 165 ntBASIC11.65□□□□□ -0.54
Sh2b3O09039 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Sh2b3O09039 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Sh2b3O09039 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Sh2b3O09039 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Sh2b3O09039 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC11.65□□□□□ -0.54
Sh2b3O09039 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Sh2b3O09039 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC11.65□□□□□ -0.54
Sh2b3O09039 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Sh2b3O09039 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Sh2b3O09039 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Sh2b3O09039 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Sh2b3O09039 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Sh2b3O09039 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Sh2b3O09039 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Sh2b3O09039 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
Sh2b3O09039 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
Sh2b3O09039 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Sh2b3O09039 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
Sh2b3O09039 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.55
Sh2b3O09039 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Sh2b3O09039 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.55
Sh2b3O09039 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Sh2b3O09039 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Sh2b3O09039 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Sh2b3O09039 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Sh2b3O09039 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC11.64□□□□□ -0.55
Sh2b3O09039 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Sh2b3O09039 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC11.64□□□□□ -0.55
Sh2b3O09039 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Sh2b3O09039 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Sh2b3O09039 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Sh2b3O09039 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Sh2b3O09039 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Sh2b3O09039 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC11.64□□□□□ -0.55
Sh2b3O09039 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Sh2b3O09039 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Sh2b3O09039 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Sh2b3O09039 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Sh2b3O09039 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC11.64□□□□□ -0.55
Sh2b3O09039 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Sh2b3O09039 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC11.64□□□□□ -0.55
Sh2b3O09039 Gm5187-201ENSMUST00000117317 991 ntBASIC11.64□□□□□ -0.55
Sh2b3O09039 Gm8213-201ENSMUST00000118191 441 ntBASIC11.64□□□□□ -0.55
Sh2b3O09039 Gm12537-201ENSMUST00000119266 1002 ntBASIC11.64□□□□□ -0.55
Sh2b3O09039 Gm12070-201ENSMUST00000119551 1002 ntBASIC11.64□□□□□ -0.55
Sh2b3O09039 Gm12671-201ENSMUST00000119978 1002 ntBASIC11.64□□□□□ -0.55
Sh2b3O09039 Gm13292-201ENSMUST00000120014 1000 ntBASIC11.64□□□□□ -0.55
Sh2b3O09039 Gm16177-201ENSMUST00000120728 718 ntBASIC11.64□□□□□ -0.55
Sh2b3O09039 Gm12403-201ENSMUST00000121384 959 ntBASIC11.64□□□□□ -0.55
Sh2b3O09039 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC11.64□□□□□ -0.55
Sh2b3O09039 Gm10359-201ENSMUST00000180167 1002 ntBASIC11.64□□□□□ -0.55
Sh2b3O09039 Gm12033-201ENSMUST00000180654 1002 ntBASIC11.64□□□□□ -0.55
Sh2b3O09039 Gm5559-201ENSMUST00000180755 1002 ntBASIC11.64□□□□□ -0.55
Sh2b3O09039 Gm4335-201ENSMUST00000182581 1004 ntBASIC11.64□□□□□ -0.55
Sh2b3O09039 Gm38144-201ENSMUST00000192790 465 ntBASIC11.64□□□□□ -0.55
Sh2b3O09039 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Sh2b3O09039 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC11.64□□□□□ -0.55
Sh2b3O09039 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC11.64□□□□□ -0.55
Sh2b3O09039 AC073947.2-201ENSMUST00000215888 1130 ntBASIC11.64□□□□□ -0.55
Sh2b3O09039 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC11.64□□□□□ -0.55
Sh2b3O09039 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Sh2b3O09039 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Sh2b3O09039 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Sh2b3O09039 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Sh2b3O09039 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Sh2b3O09039 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Sh2b3O09039 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Sh2b3O09039 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Sh2b3O09039 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Sh2b3O09039 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Sh2b3O09039 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Sh2b3O09039 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Sh2b3O09039 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Sh2b3O09039 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Sh2b3O09039 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Sh2b3O09039 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Sh2b3O09039 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Sh2b3O09039 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Sh2b3O09039 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Sh2b3O09039 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Sh2b3O09039 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Sh2b3O09039 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms