Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 AC138604.1-201ENSMUST00000226969 739 ntBASIC11.79□□□□□ -0.52
Pcdh1F7BJK1 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdh1F7BJK1 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdh1F7BJK1 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdh1F7BJK1 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdh1F7BJK1 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdh1F7BJK1 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdh1F7BJK1 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdh1F7BJK1 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdh1F7BJK1 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdh1F7BJK1 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdh1F7BJK1 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdh1F7BJK1 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC11.79□□□□□ -0.52
Pcdh1F7BJK1 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdh1F7BJK1 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC11.79□□□□□ -0.52
Pcdh1F7BJK1 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdh1F7BJK1 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdh1F7BJK1 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdh1F7BJK1 CT009757.3-201ENSMUST00000223367 2320 ntBASIC11.78□□□□□ -0.52
Pcdh1F7BJK1 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC11.78□□□□□ -0.52
Pcdh1F7BJK1 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdh1F7BJK1 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdh1F7BJK1 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdh1F7BJK1 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdh1F7BJK1 AC096628.2-201ENSMUST00000225443 1413 ntBASIC11.78□□□□□ -0.52
Pcdh1F7BJK1 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdh1F7BJK1 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdh1F7BJK1 Gm45266-201ENSMUST00000210111 2173 ntBASIC11.78□□□□□ -0.52
Pcdh1F7BJK1 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdh1F7BJK1 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdh1F7BJK1 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdh1F7BJK1 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdh1F7BJK1 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdh1F7BJK1 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdh1F7BJK1 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdh1F7BJK1 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC11.78□□□□□ -0.52
Pcdh1F7BJK1 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdh1F7BJK1 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC11.78□□□□□ -0.52
Pcdh1F7BJK1 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdh1F7BJK1 Gm4875-201ENSMUST00000118257 786 ntBASIC11.78□□□□□ -0.52
Pcdh1F7BJK1 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC11.78□□□□□ -0.52
Pcdh1F7BJK1 Mir6956-201ENSMUST00000183598 62 ntBASIC11.78□□□□□ -0.52
Pcdh1F7BJK1 AC134335.2-201ENSMUST00000227660 440 ntBASIC11.78□□□□□ -0.52
Pcdh1F7BJK1 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdh1F7BJK1 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdh1F7BJK1 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
Pcdh1F7BJK1 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdh1F7BJK1 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdh1F7BJK1 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdh1F7BJK1 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdh1F7BJK1 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC11.78□□□□□ -0.52
Pcdh1F7BJK1 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdh1F7BJK1 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdh1F7BJK1 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Pcdh1F7BJK1 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Pcdh1F7BJK1 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.52
Pcdh1F7BJK1 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Pcdh1F7BJK1 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Pcdh1F7BJK1 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Pcdh1F7BJK1 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Pcdh1F7BJK1 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Pcdh1F7BJK1 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Pcdh1F7BJK1 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC11.77□□□□□ -0.52
Pcdh1F7BJK1 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Pcdh1F7BJK1 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC11.77□□□□□ -0.52
Pcdh1F7BJK1 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC11.77□□□□□ -0.53
Pcdh1F7BJK1 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC11.77□□□□□ -0.53
Pcdh1F7BJK1 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pcdh1F7BJK1 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pcdh1F7BJK1 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Pcdh1F7BJK1 Gm15920-201ENSMUST00000118998 402 ntBASIC11.77□□□□□ -0.53
Pcdh1F7BJK1 Gm11434-201ENSMUST00000122379 629 ntBASIC11.77□□□□□ -0.53
Pcdh1F7BJK1 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pcdh1F7BJK1 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Pcdh1F7BJK1 Gm7775-201ENSMUST00000218871 853 ntBASIC11.77□□□□□ -0.53
Pcdh1F7BJK1 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC11.77□□□□□ -0.53
Pcdh1F7BJK1 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Pcdh1F7BJK1 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pcdh1F7BJK1 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pcdh1F7BJK1 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pcdh1F7BJK1 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pcdh1F7BJK1 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC11.77□□□□□ -0.53
Pcdh1F7BJK1 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pcdh1F7BJK1 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pcdh1F7BJK1 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Pcdh1F7BJK1 Gm15222-202ENSMUST00000228667 1726 ntBASIC11.77□□□□□ -0.53
Pcdh1F7BJK1 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pcdh1F7BJK1 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pcdh1F7BJK1 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pcdh1F7BJK1 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC11.77□□□□□ -0.53
Pcdh1F7BJK1 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pcdh1F7BJK1 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pcdh1F7BJK1 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdh1F7BJK1 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdh1F7BJK1 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdh1F7BJK1 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdh1F7BJK1 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdh1F7BJK1 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdh1F7BJK1 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Pcdh1F7BJK1 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC11.76□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms